Rearranged Oriloc output example: Previous Index Next
Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.
Genome size (bp): 1657990
Number of genes 1716
Oriloc predictions: Origin 0 kb Terminus 843 kb
Worning et al., 2006: Origin 1 kb Terminus 856 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 617.359 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 532.41 kb
Consensus predictions: Origin 0 kb Terminus 843 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew reverse | 1287 | NA | 858 |
| AT-skew forward | 438 | NA | 864 |
| AT-skew reverse | 1280 | NA | 845 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew reverse | 831 (0 kb) | 1287 (857.5285 kb) | leading | -0.054 |
| 1288 (858.2535 kb) | 1716 (1657.814 kb) | lagging | -0.151 | |
| AT-skew forward | 1 (0 kb) | 438 (863.7555 kb) | leading | -0.039 |
| 439 (865.7545 kb) | 830 (1657.814 kb) | lagging | 0.023 | |
| AT-skew reverse | 831 (0 kb) | 1280 (845.193 kb) | leading | -0.025 |
| 1281 (846.159 kb) | 1716 (1657.814 kb) | lagging | 0.035 |
More G than C on the leading strand for replication - for reverse encoded genes.