Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia.
Genome size (bp): 1516355
Number of genes 887
Oriloc predictions: Origin 0 kb Terminus 740 kb
Worning et al., 2006: Origin 15 kb Terminus 730 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1261.994 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 507.29 kb
Consensus predictions: Origin 0 kb Terminus 740 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 60 | NA | 223 |
| 210 | NA | 734 | |
| GC-skew reverse | 627 | NA | 734 |
| 773 | NA | 1111 | |
| AT-skew forward | 212 | NA | 738 |
| 314 | NA | 1191 | |
| AT-skew reverse | 624 | NA | 715 |
| 658 | NA | 823 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 60 (222.5755 kb) | leading | 0.439 |
| 61 (225.6805 kb) | 210 (733.5285 kb) | leading | 0.547 | |
| 211 (737.9065 kb) | 415 (1516.329 kb) | lagging | -0.134 | |
| GC-skew reverse | 416 (0 kb) | 627 (733.991 kb) | leading | 0.157 |
| 628 (739.0425 kb) | 773 (1110.7055 kb) | lagging | -0.591 | |
| 774 (1114.939 kb) | 887 (1516.329 kb) | lagging | -0.521 | |
| AT-skew forward | 1 (0 kb) | 212 (738.2305 kb) | leading | -0.162 |
| 213 (740.293 kb) | 314 (1191.397 kb) | lagging | 0.103 | |
| 315 (1194.01 kb) | 415 (1516.329 kb) | lagging | 0.042 | |
| AT-skew reverse | 416 (0 kb) | 624 (715.246 kb) | leading | -0.083 |
| 625 (718.904 kb) | 658 (822.5705 kb) | lagging | 0.11 | |
| 659 (823.4865 kb) | 887 (1516.329 kb) | lagging | 0.186 |
More G than C on the leading strand for replication.