Rearranged Oriloc output example: Previous Index Next
Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia; Borrelia burgdorferi group.
Genome size (bp): 904246
Number of genes 832
Oriloc predictions: Origin 459 kb Terminus 0 kb
Worning et al., 2006: Origin NA kb Terminus NA kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 790.251 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 459.52 kb
Consensus predictions: Origin 459 kb Terminus 0 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 141 | NA | 460 |
| GC-skew reverse | 696 | NA | 463 |
| AT-skew forward | 139 | NA | 452 |
| AT-skew reverse | 692 | NA | 450 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 141 (460.362 kb) | lagging | -0.251 |
| 142 (461.689 kb) | 409 (903.762 kb) | leading | 0.339 | |
| GC-skew reverse | 410 (0 kb) | 696 (463.127 kb) | lagging | -0.34 |
| 697 (469.729 kb) | 832 (903.762 kb) | leading | 0.259 | |
| AT-skew forward | 1 (0 kb) | 139 (452.368 kb) | lagging | 0.178 |
| 140 (455.935 kb) | 409 (903.762 kb) | leading | -0.223 | |
| AT-skew reverse | 410 (0 kb) | 692 (449.976 kb) | lagging | 0.221 |
| 693 (452.2665 kb) | 832 (903.762 kb) | leading | -0.185 |
More G than C on the leading strand for replication.