Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.
Genome size (bp): 1162204
Number of genes 1051
Oriloc predictions: Origin 1 kb Terminus 695 kb
Worning et al., 2006: Origin 1161 kb Terminus 672 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1162.128 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.75 kb
Consensus predictions: Origin 0 kb Terminus 695 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 346 | 0 | 708 |
| GC-skew reverse | 799 | 0 | 687 |
| AT-skew forward | 324 | 0 | 665 |
| AT-skew reverse | 777 | 0 | 631 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 346 (708.004 kb) | leading | 0.004 |
| 347 (714.8105 kb) | 505 (1161.987 kb) | lagging | -0.114 | |
| GC-skew reverse | 506 (0 kb) | 799 (687.029 kb) | leading | 0.141 |
| 800 (688.226 kb) | 1051 (1161.987 kb) | lagging | -0.024 | |
| AT-skew forward | 1 (0 kb) | 324 (664.6885 kb) | leading | -0.342 |
| 325 (667.086 kb) | 505 (1161.987 kb) | lagging | -0.2 | |
| AT-skew reverse | 506 (0 kb) | 777 (631.197 kb) | leading | 0.181 |
| 778 (632.981 kb) | 1051 (1161.987 kb) | lagging | 0.317 |
More G than C on the leading strand for replication.