Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium.
Genome size (bp): 3282708
Number of genes 3057
Oriloc predictions: Origin 0 kb Terminus 1742 kb
Worning et al., 2006: Origin 3266 kb Terminus 1536 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 35.94 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.79 kb
Consensus predictions: Origin 35 kb Terminus 1742 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 893 | NA | 1652 |
| GC-skew reverse | 2050 | NA | 1407 |
| AT-skew forward | 1150 | NA | 2350 |
| AT-skew reverse | 2071 | NA | 1443 |
| 2726 | NA | 2691 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 893 (1651.9665 kb) | leading | -0.097 |
| 894 (1657.143 kb) | 1501 (3282.629 kb) | lagging | -0.22 | |
| GC-skew reverse | 1502 (0 kb) | 2050 (1406.9365 kb) | leading | 0.235 |
| 2051 (1407.6815 kb) | 3057 (3282.629 kb) | NA | 0.085 | |
| AT-skew forward | 1 (0 kb) | 1150 (2349.957 kb) | NA | -0.156 |
| 1151 (2350.6965 kb) | 1501 (3282.629 kb) | lagging | -0.108 | |
| AT-skew reverse | 1502 (0 kb) | 2071 (1443.0005 kb) | leading | 0.09 |
| 2072 (1446.0865 kb) | 2726 (2690.5165 kb) | NA | 0.169 | |
| 2727 (2691.5025 kb) | 3057 (3282.629 kb) | lagging | 0.146 |