Rearranged Oriloc output example: Previous Index Next
Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.
Genome size (bp): 1842899
Number of genes 1892
Oriloc predictions: Origin 1291 kb Terminus 339 kb
Worning et al., 2006: Origin 1293 kb Terminus 333 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1292.44 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.79 kb
Consensus predictions: Origin 1291 kb Terminus 339 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 271 | NA | 477 |
| 644 | NA | 1291 | |
| GC-skew reverse | 1240 | NA | 549 |
| 1626 | NA | 1317 | |
| AT-skew forward | 173 | NA | 334 |
| 648 | NA | 1297 | |
| AT-skew reverse | 1103 | NA | 330 |
| 1625 | NA | 1316 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 271 (477.0515 kb) | NA | 0.122 |
| 272 (478.5085 kb) | 644 (1291.189 kb) | lagging | -0.026 | |
| 645 (1292.4965 kb) | 940 (1842.768 kb) | leading | 0.192 | |
| GC-skew reverse | 941 (0 kb) | 1240 (549.146 kb) | NA | -0.054 |
| 1241 (550.54 kb) | 1626 (1317.42 kb) | lagging | -0.173 | |
| 1627 (1319.3005 kb) | 1892 (1842.768 kb) | leading | 0.026 | |
| AT-skew forward | 1 (0 kb) | 173 (333.7655 kb) | leading | -0.131 |
| 174 (335.6275 kb) | 648 (1297.0635 kb) | lagging | 0.027 | |
| 649 (1300.835 kb) | 940 (1842.768 kb) | leading | -0.091 | |
| AT-skew reverse | 941 (0 kb) | 1103 (330.0025 kb) | leading | -0.076 |
| 1104 (333.008 kb) | 1625 (1315.895 kb) | lagging | 0.082 | |
| 1626 (1317.42 kb) | 1892 (1842.768 kb) | leading | -0.03 |