Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.
Genome size (bp): 2364842
Number of genes 2083
Oriloc predictions: Origin 0 kb Terminus 1190 kb
Worning et al., 2006: Origin 2 kb Terminus 1207 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2363.17 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2364.11 kb
Consensus predictions: Origin 0 kb Terminus 1190 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 648 | 0 | 1235 |
| GC-skew reverse | 1533 | 0.02667 | 1260 |
| 1855 | 0.00667 | 1999 | |
| 1944 | 0 | 2134 | |
| AT-skew forward | 636 | 0 | 1216 |
| AT-skew reverse | 1522 | 0 | 1208 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 648 (1235.4635 kb) | leading | -0.088 |
| 649 (1236.6485 kb) | 1124 (2364.839 kb) | lagging | -0.254 | |
| GC-skew reverse | 1125 (0 kb) | 1533 (1260.383 kb) | leading | 0.234 |
| 1534 (1265.4005 kb) | 1855 (1998.5085 kb) | lagging | 0.098 | |
| 1856 (2001.1965 kb) | 1944 (2134.0925 kb) | lagging | -0.111 | |
| 1945 (2135.8005 kb) | 2083 (2364.839 kb) | lagging | 0.155 | |
| AT-skew forward | 1 (0 kb) | 636 (1216.317 kb) | leading | -0.22 |
| 637 (1217.007 kb) | 1124 (2364.839 kb) | lagging | 0.136 | |
| AT-skew reverse | 1125 (0 kb) | 1522 (1207.687 kb) | leading | -0.134 |
| 1523 (1209.6035 kb) | 2083 (2364.839 kb) | lagging | 0.256 |
More G than C on the leading strand for replication.