Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.
Genome size (bp): 1895994
Number of genes 1696
Oriloc predictions: Origin 0 kb Terminus 1150 kb
Worning et al., 2006: Origin 7 kb Terminus 1223 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 283.261 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.01 kb
Consensus predictions: Origin 0 kb Terminus 1150 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 613 | 0 | 1191 |
| GC-skew reverse | 1275 | 0 | 1174 |
| AT-skew forward | 458 | 0.01333 | 879 |
| AT-skew reverse | 1263 | 0 | 1157 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 613 (1191.31 kb) | leading | 0.256 |
| 614 (1191.8145 kb) | 816 (1895.783 kb) | lagging | -0.074 | |
| GC-skew reverse | 817 (0 kb) | 1275 (1174.0465 kb) | leading | 0.066 |
| 1276 (1174.53 kb) | 1696 (1895.783 kb) | lagging | -0.259 | |
| AT-skew forward | 1 (0 kb) | 458 (879.309 kb) | leading | -0.122 |
| 459 (881.0635 kb) | 816 (1895.783 kb) | NA | -0.083 | |
| AT-skew reverse | 817 (0 kb) | 1263 (1157.493 kb) | leading | 0.073 |
| 1264 (1158.7425 kb) | 1696 (1895.783 kb) | lagging | 0.123 |
More G than C on the leading strand for replication.