Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.
Genome size (bp): 5727534
Number of genes 5060
Oriloc predictions: Origin 0 kb Terminus 1825 kb
Worning et al., 2006: Origin 79 kb Terminus 1858 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 4540.614 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.68 kb
Consensus predictions: Origin 79 kb Terminus 1825 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1153 | 0 | 1820 |
| GC-skew reverse | 2210 | 0 | 1730 |
| AT-skew reverse | 4584 | 0 | 5090 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1153 (1820.1805 kb) | leading | 0.043 |
| 1154 (1821.0975 kb) | 1811 (5727.179 kb) | lagging | -0.131 | |
| GC-skew reverse | 1812 (0 kb) | 2210 (1730.1935 kb) | leading | 0.122 |
| 2211 (1730.9995 kb) | 5060 (5727.179 kb) | lagging | -0.068 | |
| AT-skew reverse | 1812 (0 kb) | 4584 (5089.528 kb) | lagging | 0.164 |
| 4585 (5090.958 kb) | 5060 (5727.179 kb) | lagging | 0.13 |