Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus.
Genome size (bp): 1827111
Number of genes 1717
Oriloc predictions: Origin 2 kb Terminus 918 kb
Worning et al., 2006: Origin 0 kb Terminus 902 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 50.929 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.68 kb, 541.84 kb
Consensus predictions: Origin 2 kb Terminus 918 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 725 | NA | 949 |
| GC-skew reverse | 1063 | NA | 921 |
| AT-skew forward | 722 | NA | 924 |
| AT-skew reverse | 1020 | NA | 751 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 725 (949.2775 kb) | leading | 0.267 |
| 726 (954.9685 kb) | 899 (1826.624 kb) | lagging | -0.177 | |
| GC-skew reverse | 900 (0 kb) | 1063 (921.4205 kb) | leading | 0.123 |
| 1064 (922.743 kb) | 1717 (1826.624 kb) | lagging | -0.218 | |
| AT-skew forward | 1 (0 kb) | 722 (924.071 kb) | leading | -0.012 |
| 723 (934.747 kb) | 899 (1826.624 kb) | lagging | -0.132 | |
| AT-skew reverse | 900 (0 kb) | 1020 (750.737 kb) | leading | 0.167 |
| 1021 (755.523 kb) | 1717 (1826.624 kb) | lagging | 0.035 |
More G than C on the leading strand for replication.