Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 1937111
Number of genes 1979
Oriloc predictions: Origin 0 kb Terminus 991 kb
Worning et al., 2006: Origin 1927 kb Terminus 1006 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1847.203 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 0 kb Terminus 991 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 845 | NA | 986 |
| GC-skew reverse | 1307 | NA | 989 |
| 1875 | NA | 1758 | |
| 1919 | NA | 1817 | |
| AT-skew forward | 441 | NA | 548 |
| 487 | NA | 580 | |
| 960 | NA | 1542 | |
| AT-skew reverse | 1472 | NA | 1216 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 845 (985.816 kb) | leading | 0.057 |
| 846 (986.53 kb) | 1113 (1937.077 kb) | lagging | -0.126 | |
| GC-skew reverse | 1114 (0 kb) | 1307 (988.6445 kb) | leading | 0.163 |
| 1308 (993.1355 kb) | 1875 (1758.0855 kb) | lagging | -0.065 | |
| 1876 (1759.487 kb) | 1919 (1817.0755 kb) | lagging | 0.178 | |
| 1920 (1819.6215 kb) | 1979 (1937.077 kb) | lagging | -0.104 | |
| AT-skew forward | 1 (0 kb) | 441 (547.566 kb) | leading | -0.13 |
| 442 (549.874 kb) | 487 (579.899 kb) | leading | 0.032 | |
| 488 (582.04 kb) | 960 (1541.514 kb) | NA | -0.111 | |
| 961 (1545.6765 kb) | 1113 (1937.077 kb) | lagging | -0.056 | |
| AT-skew reverse | 1114 (0 kb) | 1472 (1216.3205 kb) | NA | 0.134 |
| 1473 (1217.336 kb) | 1979 (1937.077 kb) | lagging | 0.107 |