Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.
Genome size (bp): 1553927
Number of genes 1612
Oriloc predictions: Origin 0 kb Terminus 748 kb
Worning et al., 2006: Origin NA kb Terminus NA kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 141.352 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.68 kb, 662.74 kb
Consensus predictions: Origin 0 kb Terminus 748 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 485 | 0 | 794 |
| GC-skew reverse | 1088 | 0 | 576 |
| AT-skew forward | 661 | 0 | 1178 |
| AT-skew reverse | 1056 | 0.02333 | 435 |
| 1072 | 0.02333 | 477 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 485 (793.6555 kb) | leading | 0.07 |
| 486 (795.1175 kb) | 849 (1553.786 kb) | lagging | -0.102 | |
| GC-skew reverse | 850 (0 kb) | 1088 (576.1375 kb) | leading | 0.078 |
| 1089 (578.214 kb) | 1612 (1553.786 kb) | lagging | -0.052 | |
| AT-skew forward | 1 (0 kb) | 661 (1177.6555 kb) | NA | -0.114 |
| 662 (1177.824 kb) | 849 (1553.786 kb) | lagging | -0.033 | |
| AT-skew reverse | 850 (0 kb) | 1056 (435.134 kb) | leading | 0.099 |
| 1057 (435.7355 kb) | 1072 (476.889 kb) | leading | 0.254 | |
| 1073 (509.53 kb) | 1612 (1553.786 kb) | NA | 0.097 |