For each paper, click on the [number] to obtain reprint (.pdf) or BibTex entry (.pdf)

[71] Crabot J., Clappe S., Dray S., Datry T. (2019). Testing the Mantel statistic with a spatially-constrained permutation procedure. Methods in Ecology and Evolution, in press. ISSN 2041210X. 10.1111/2041-210X.13141.
[70] Ohlmann M., Miele V., Dray S., Chalmandrier L., O'Connor L., Thuiller W. (2019). Diversity indices for ecological networks: a unifying framework using Hill numbers. Ecology Letters, in press. 10.1111/ele.13221.
[69] Bauman D., Drouet T., Dray S., Vleminckx J. (2018). Disentangling good from bad practices in the selection of spatial or phylogenetic eigenvectors. Ecography, 41:1638--1649. ISSN 16000587. 10.1111/ecog.03380.
[68] Bauman D., Drouet T., Fortin M.J., Dray S. (2018). Optimizing the choice of a spatial weighting matrix in eigenvector-based methods. Ecology, 99(10):2159--2166. ISSN 00129658. 10.1002/ecy.2469.
[67] Bougeard S., Dray S. (2018). Supervised Multiblock Analysis in R with the ade4 Package. Journal of Statistical Software, 86(1):1--17. 10.18637/jss.v086.i01.
[66] Braga J., ter Braak C.J.F., Thuiller W., Dray S. (2018). Integrating spatial and phylogenetic information in the fourth-corner analysis to test trait-environment relationships. Ecology, 99(12):2667--2674. ISSN 00129658. 10.1002/ecy.2530.
[65] Clappe S., Dray S., Peres-Neto P.R. (2018). Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis. Ecology, 99(8):1737--1747. ISSN 00129658. 10.1002/ecy.2376.
[64] ter Braak C.J., Šmilauer P., Dray S. (2018). Algorithms and biplots for double constrained correspondence analysis. Environmental and Ecological Statistics, 25:171--197. ISSN 15733009. 10.1007/s10651-017-0395-x.
[63] ter Braak C.J., Peres-Neto P.R., Dray S. (2018). Simple parametric tests for trait–environment association. Journal of Vegetation Science, 29:801--811. ISSN 16541103. 10.1111/jvs.12666.
[62] Peres-Neto P.R., Dray S., ter Braak C.J. (2017). Linking trait variation to the environment: Critical issues with community-weighted mean correlation resolved by the fourth-corner approach. Ecography, 40:806--816. ISSN 16000587. 10.1111/ecog.02302.
[61] Siberchicot A., Julien-Laferrière A., Dufour A.B., Thioulouse J., Dray S. (2017). adegraphics: an S4 lattice-based package for the representation of multivariate data. The R Journal, 9(2):198--2012.
[60] ter Braak C., Dray S., Peres-Neto P. (2017). A critical issue in model-based inference for studying trait-based community assembly and a solution. PeerJ, 5:e2885. ISSN 2167-8359. 10.7717/peerj.2885.
[59] Trivellone V., Bougeard S., Giavi S., Krebs P., Balseiro D., Dray S., Moretti M. (2017). Factors shaping community assemblages and species occurrence of different trophic levels. Ecology and Evolution, 7:4745--4754. ISSN 20457758. 10.1002/ece3.3061.
[58] Bréchignac F., Oughton D., Mays C., Barnthouse L., Beasley J.C., Bonisoli-Alquati A., Bradshaw C., Brown J., Dray S., Geras'kin S., Glenn T., Higley K., Ishida K., Kapustka L., Kautsky U., Kuhne W., Lynch M., Mappes T., Mihok S., Møller A.P., Mothersill C., Mousseau T.A., Otaki J., Pryakhin E., Rhodes O.E., Salbu B., Strand P., Tsukada H. (2016). Addressing ecological effects of radiation on populations and ecosystems to improve protection of the environment against radiation: Agreed statements from a Consensus Symposium. Journal of Environmental Radioactivity, 158-159:21--29. ISSN 1879-1700. 10.1016/j.jenvrad.2016.03.021.
[57] Chamaillé-Jammes S., Charbonnel A., Dray S., Madzikanda H., Fritz H. (2016). Spatial distribution of a large herbivore community at waterholes: An assessment of its stability over years in Hwange National Park, Zimbabwe. PLoS ONE, 11(4):e0153639. ISSN 19326203. 10.1371/journal.pone.0153639.
[56] Covain R., Fisch-Muller S., Oliveira C., Mol J.H., Montoya-Burgos J.I., Dray S. (2016). Molecular phylogeny of the highly diversified catfish subfamily Loricariinae (Siluriformes, Loricariidae) reveals incongruences with morphological classification. Molecular Phylogenetics and Evolution, 94:492--517. ISSN 10557903. 10.1016/j.ympev.2015.10.018.
[55] Díaz S., Kattge J., Cornelissen J.H.C., Wright I.J., Lavorel S., Dray S., Reu B., Kleyer M., Wirth C., Prentice I.C., Garnier E., Bönisch G., Westoby M., Poorter H., Reich P.B., Moles A.T., Dickie J., Gillison A.N., Zanne A.E., Chave J., Wright S.J., Sheremet'ev S.N., Jactel H., Baraloto C., Cerabolini B., Pierce S., Shipley B., Kirkup D., Casanoves F., Joswig J.S., Günther A., Falczuk V., Rüger N., Mahecha M.D., Gorné L.D. (2016). The global spectrum of plant form and function. Nature, 529:167--171. ISSN 0028-0836. 10.1038/nature16489.
[54] Ferry N., Dray S., Fritz H., Valeix M. (2016). Interspecific interference competition at the resource patch scale: do large herbivores spatially avoid elephants while accessing water? Journal of Animal Ecology, 85:1574--1585. ISSN 00218790. 10.1111/1365-2656.12582.
[53] Dray S., Pavoine S., Aguirre de Carcer D. (2015). Considering external information to improve the phylogenetic comparison of microbial communities: a new approach based on constrained Double Principal Coordinates Analysis (cDPCoA). Molecular Ecology Resources, 15:242--249. 10.1111/1755-0998.12300.
[52] Dray S., Josse J. (2015). Principal component analysis with missing values: a comparative survey of methods. Plant Ecology, 216:657--667. 10.1007/s11258-014-0406-z.
[51] Wagner H.H., Dray S. (2015). Generating spatially constrained null models for irregularly spaced data using Moran spectral randomization methods. Methods in Ecology and Evolution, 6(10):1169--1178. ISSN 2041210X. 10.1111/2041-210X.12407.
[50] Dray S., Choler P., Dolédec S., Peres-Neto P.R., Thuiller W., Pavoine S., ter Braak C.J. (2014). Combining the fourth-corner and the RLQ methods for assessing trait responses to environmental variation. Ecology, 95(1):14--21.
[49] Dray S. (2014). Analysing a pair of tables: coinertia analysis and duality diagrams. In J. Blasius, M. Greenacre, editors, Visualization and verbalization of data, pages 289--300. CRC Press.
[48] Gimenez O., Buckland S.T., Morgan B.J.T., Bez N., Bertrand S., Choquet R., Dray S., Etienne M.P., Fewster R., Gosselin F., Mérigot B., Monestiez P., Morales J.M., Mortier F., Munoz F., Ovaskainen O., Pavoine S., Pradel R., Schurr F.M., Thomas L., Thuiller W., Trenkel V., de Valpine P., Rexstad E. (2014). Statistical ecology comes of age. Biology Letters, 10(12):3--6. ISSN 1744-957X. 10.1098/rsbl.2014.0698.
[47] Hurley M.A., Hebblewhite M., Gaillard J.M., Dray S., Taylor K.A., Smith W.K., Zager P., Bonenfant C. (2014). Functional analysis of Normalized Difference Vegetation Index curves reveals overwinter mule deer survival is driven by both spring and autumn phenology. Philosophical Transactions of the Royal Society of London Series B, Biological Sciences, 369:20130196.
[46] Miele V., Picard F., Dray S. (2014). Spatially constrained clustering of ecological networks. Methods in Ecology and Evolution, 5(8):771--779. ISSN 2041210X. 10.1111/2041-210X.12208.
[45] Martin J., van Moorter B., Revilla E., Blanchard P., Dray S., Quenette P.Y., Allainé D., Swenson J.E. (2013). Reciprocal modulation of internal and external factors determines individual movements. Journal of Animal Ecology, 82:290--300. ISSN 1365-2656. 10.1111/j.1365-2656.2012.02038.x.
[44] Mason N.W., de Bello F., Mouillot D., Pavoine S., Dray S. (2013). A guide for using functional diversity indices to reveal changes in assembly processes along ecological gradients. Journal of Vegetation Science, 24:794--806. ISSN 11009233. 10.1111/jvs.12013.
[43] Mason N.W.H., Wiser S.K., Richardson S.J., Thorsen M.J., Holdaway R.J., Dray S., Thomson F.J., Carswell F.E. (2013). Functional traits reveal processes driving natural afforestation at large spatial scales. PLoS ONE, 8(9):e75219. ISSN 1932-6203. 10.1371/journal.pone.0075219.
[42] Reino L., Beja P., Araújo M.B., Dray S., Segurado P. (2013). Does local habitat fragmentation affect large-scale distributions? The case of a specialist grassland bird. Diversity and Distributions, 19:423--432. ISSN 13669516. 10.1111/ddi.12019.
[41] Siberchicot A., Dray S. (2013). Conference Report: Deuxièmes Rencontres R. The R Journal, 5:164--165.
[40] Covain R., Fisch-Muller S., Montoya-Burgos J., Mol J., Le Bail P.Y., Dray S. (2012). The Harttiini (Siluriformes, Loricariidae) from the Guianas: a multi-table approach to assess their diversity, evolution, and distribution. Cybium, 36(1):115--161.
[39] Dray S., Pélissier R., Couteron P., Fortin M.J., Legendre P., Peres-Neto P.R., Bellier E., Bivand R., Blanchet F.G., De Caceres M., Dufour A.B., Heegaard E., Jombart T., Munoz F., Oksanen J., Thioulouse J., Wagner H.H. (2012). Community ecology in the age of multivariate multiscale spatial analysis. Ecological Monographs, 82(3):257--275.
[38] Kleyer M., Dray S., Bello F., Lepš J., Pakeman R.J., Strauss B., Thuiller W., Lavorel S. (2012). Assessing species and community functional responses to environmental gradients: which multivariate methods? Journal of Vegetation Science, 23:805--821. ISSN 11009233. 10.1111/j.1654-1103.2012.01402.x.
[37] Münkemüller T., Lavergne S., Bzeznik B., Dray S., Jombart T., Schiffers K., Thuiller W. (2012). How to measure and test phylogenetic signal. Methods in Ecology and Evolution, 3:743--756.
[36] Peres-Neto P.R., Leibold M., Dray S. (2012). Assessing the effects of spatial contingency and environmental filtering on metacommunity phylogenetics. Ecology, 93(8):S14--S30.
[35] ter Braak C., Cormont A., Dray S. (2012). Improved testing of species traits-environment relationships in the fourth corner problem. Ecology, 93:1525--1526.
[34] Tolon V., Martin J., Dray S., Loison A., Fischer C., Baubet E. (2012). Predator-prey spatial game as a tool to understand the effects of protected areas on harvester-wildlife interactions. Ecological Applications, 22(2):648--657.
[33] Wesuls D., Oldeland J., Dray S. (2012). Disentangling plant trait responses to livestock grazing from spatio-temporal variation: the partial RLQ approach. Journal of Vegetation Science, 23:98--113. ISSN 11009233. 10.1111/j.1654-1103.2011.01342.x.
[32] Brind'Amour A., Boisclair D., Dray S., Legendre P. (2011). Relationships between species feeding traits and environmental conditions in fish communities: a three-matrix approach. Ecological Applications, 21(2):363--377.
[31] Dray S. (2011). A new perspective about Moran's coefficient: spatial autocorrelation as a linear regression problem. Geographical Analysis, 43:127--141.
[30] Dray S., Jombart T. (2011). Revisiting Guerry's data: introducing spatial constraints in multivariate analysis. The Annals of Applied Statistics, 5(4):2278--2299.
[29] Dray S., Royer-Carenzi M., Calenge C. (2010). The exploratory analysis of autocorrelation in animal-movement studies. Ecological Research, 25:673--681.
[28] Jombart T., Balloux F., Dray S. (2010). adephylo: new tools for investigating the phylogenetic signal in biological traits. Bioinformatics, 26:1907--1909.
[27] Venner S., Bernstein C., Dray S., Bel-Venner M.C. (2010). Make love not war: when should less competitive males choose low-quality but defendable females? The American Naturalist, 175:650--661.
[26] Calenge C., Dray S., Royer-Carenzi M. (2009). The concept of animals trajectories from a data analysis perspective. Ecological Informatics, 4:34--41.
[25] Jombart T., Dray S., Dufour A.B. (2009). Finding essential scales of spatial variation in ecological data: a multivariate approach. Ecography, 32:161--168.
[24] Tolon V., Dray S., Loison A., Zeileis A., Fischer C., Baubet E. (2009). Responding to spatial and temporal variations in predation risk: space use of a game species in a changing landscape of fear. Canadian Journal of Zoology, 87:1129--1137.
[23] Bel-Venner M.C., Dray S., Allainé D., Menu F., Venner S. (2008). Unexpected male choosiness for mates in a spider. Proceedings of the Royal Society of London Series B - Biological Sciences, 275:77--82.
[22] Covain R., Dray S., Fisch-Muller S., Montoya-Burgos J. (2008). Assessing phylogenetic dependence of morphological traits using co-inertia prior to investigate character evolution in Loricariinae catfishes. Molecular Phylogenetics and Evolution, 46(3):986--1002.
[21] Dray S., Saïd S., Débias F. (2008). Spatial ordination of vegetation data using a generalization of Wartenberg's multivariate spatial correlation. Journal of Vegetation Science, 19:45--56.
[20] Dray S., Legendre P. (2008). Testing the species traits-environment relationships: the fourth-corner problem revisited. Ecology, 89:3400--3412.
[19] Dray S. (2008). On the number of principal components: A test of dimensionality based on measurements of similarity between matrices. Computational Statistics and Data Analysis, 52:2228--2237.
[18] Pélissier R., Couteron P., Dray S. (2008). Analyzing or explaining beta diversity? Comment. Ecology, 89:3227--3332.
[17] Bonenfant C., Gaillard J.M., Dray S., Loison A., Royer M., Chessel D. (2007). Testing sexual segregation and aggregation: old ways are best. Ecology, 88:3202--3208.
[16] Dray S., Dufour A.B. (2007). The ade4 package: implementing the duality diagram for ecologists. Journal of Statistical Software, 22(4):1--20.
[15] Dray S., Dufour A.B., Chessel D. (2007). The ade4 package - II: Two-table and K-table methods. R News, 7(2):47--52.
[14] Thioulouse J., Dray S. (2007). Interactive multivariate data analysis in R with the ade4 and ade4TkGUI packages. Journal of Statistical Software, 22(5):1--14.
[13] Dray S., Legendre P., Peres-Neto P.R. (2006). Spatial modeling: a comprehensive framework for principal coordinate analysis of neighbor matrices (PCNM). Ecological Modelling, 196:483--493.
[12] Peres-Neto P.R., Legendre P., Dray S., Borcard D. (2006). Variation partitioning of species data matrices: estimation and comparison of fractions. Ecology, 87:2614--2625.
[11] Tall L., Cattaneo A., Cloutier L., Dray S., Legendre P. (2006). Resource partitioning in a grazer guild feeding on a multilayer diatom mat. Journal of the North American Benthological Society, 25:800--810.
[10] Pettorelli N., Dray S., Maillard D. (2005). Coupling principal component analysis and GIS to map deer habitats. Wildlife Biology, 11:363--370.
[9] Dray S., Pettorelli N., Chessel D. (2003). Multivariate analysis of incomplete mapped data. Transactions in GIS, 7:411--422.
[8] Dray S., Chessel D., Thioulouse J. (2003). Co-inertia analysis and the linking of ecological data tables. Ecology, 84:3078--3089.
[7] Dray S., Chessel D., Thioulouse J. (2003). Procrustean co-inertia analysis for the linking of multivariate data sets. Ecoscience, 10(1):110--119.
[6] Gimaret-Carpentier C., Dray S., Pascal J.P. (2003). Broad-scale biodiversity pattern of the endemic tree flora of the Western Ghats (India) using canonical correlation analysis of herbarium records. Ecography, 26:429--444.
[5] Pélissier R., Couteron P., Dray S., Sabatier D. (2003). Consistency between ordination techniques and diversity measurements: two alternative strategies for species occurrence data. Ecology, 84:242--251.
[4] Pettorelli N., Dray S., Gaillard J.M., Chessel D., Duncan P., Illius A., Guillon N., Klein F., Van Laere G. (2003). Spatial variation in springtime food resources influences the winter body mass of roe deer fawn. Oecologia, 137:363--369.
[3] Dray S., Pettorelli N., Chessel D. (2002). Matching data sets from two different spatial samples. Journal of Vegetation Science, 13:867--874.
[2] Michel J.F., Dray S., de La Rocque S., Desquesnes M., Solano P., De Wispelaere G., Cuisance D. (2002). Modelling bovine trypanosomosis spatial distribution by GIS in an agro-pastoral zone of Burkina Faso. Preventive Veterinary Medicine, 56:5--18.
[1] Pélissier R., Dray S., Sabatier D. (2002). Within-plot relationships between tree species occurrences and hydrological soil constraints: an example in French Guiana investigated through canonical correlation analysis. Plant Ecology, 162(2):143--156.

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