DAGraph.h

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//
// File: DAGraph.h
// Authors:
//   Laurent Guéguen
// Last modified: lundi 19 décembre 2016, à 22h 46
//
 
/*
  Copyright or © or Copr. Bio++ Development Team, (November 17, 2004)
  
  This software is a computer program whose purpose is to provide utilitary
  classes. This file belongs to the Bio++ Project.
  
  This software is governed by the CeCILL license under French law and
  abiding by the rules of distribution of free software. You can use,
  modify and/ or redistribute the software under the terms of the CeCILL
  license as circulated by CEA, CNRS and INRIA at the following URL
  "http://www.cecill.info".
  
  As a counterpart to the access to the source code and rights to copy,
  modify and redistribute granted by the license, users are provided only
  with a limited warranty and the software's author, the holder of the
  economic rights, and the successive licensors have only limited
  liability.
  
  In this respect, the user's attention is drawn to the risks associated
  with loading, using, modifying and/or developing or reproducing the
  software by the user in light of its specific status of free software,
  that may mean that it is complicated to manipulate, and that also
  therefore means that it is reserved for developers and experienced
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  The fact that you are presently reading this means that you have had
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*/
 
#ifndef BPP_GRAPH_DAGRAPH_H
#define BPP_GRAPH_DAGRAPH_H
 
#include <algorithm>
#include <iostream>
#include <ostream>
#include <string>
#include <vector>
 
#include "../Exceptions.h"
#include "../Numeric/VectorTools.h"
#include "Graph.h"
 
namespace bpp
{
class DAGraph :
  public virtual Graph
{
public:
  virtual bool isValid() const = 0;
 
  virtual bool isRooted() const = 0;
 
  virtual bool hasFather(Graph::NodeId node) const = 0;
 
  virtual std::vector<Graph::NodeId> getFathers(Graph::NodeId node) const = 0;
 
  virtual size_t getNumberOfFathers(Graph::NodeId node) const = 0;
 
  virtual void addFather(Graph::NodeId node, Graph::NodeId father) = 0;
 
  virtual void addFather(Graph::NodeId node, Graph::NodeId father, Graph::EdgeId edgeId) = 0;
 
  virtual void removeFather(Graph::NodeId node, Graph::NodeId father) = 0;
 
  virtual std::vector<Graph::NodeId> removeFathers(Graph::NodeId node) = 0;
 
  virtual std::vector<Graph::NodeId> getLeavesUnderNode(Graph::NodeId node) const = 0;
 
  virtual std::vector<Graph::NodeId> getSons(Graph::NodeId node) const = 0;
 
  virtual size_t getNumberOfSons(Graph::NodeId node) const = 0;
 
  void addSon(Graph::NodeId node, Graph::NodeId sonNode);
 
  void addSon(Graph::NodeId node, Graph::NodeId sonNode, Graph::EdgeId edge);
 
  virtual std::vector<Graph::NodeId> removeSons(Graph::NodeId node) = 0;
 
  virtual void removeSon(Graph::NodeId node, Graph::NodeId son) = 0;
 
  virtual void rootAt(Graph::NodeId newRoot) = 0;
 
  virtual std::vector<Graph::NodeId> getBelowNodes(Graph::NodeId localRoot) const = 0;
 
  virtual std::vector<Graph::EdgeId> getBelowEdges(Graph::NodeId localRoot) const = 0;
};
}
#endif // BPP_GRAPH_DAGRAPH_H