bpp::RaaSeqAttributes Class Reference

Contains various attributes of a sequence (length, name, species name, genetic code, etc...). More...

#include <RaaSeqAttributes.h>

List of all members.

Public Member Functions
std::string	getName ()
	Returns the sequence name.
int	getLength ()
	Returns the sequence length.
int	getRank ()
	Returns the sequence database rank.
int	getGeneticCode ()
	Returns the sequence's NCBI genetic code number (1 is universal). Meaningful only for CDS sequences.
int	getReadingFrame ()
	Returns the sequence reading frame (0, 1, or 2). Meaningful only for CDS sequences.
std::string	getSpeciesName ()
	Returns the sequence species name.
std::string	getAccessionNumber ()
	Returns the sequence primary accession number.
std::string	getDescription ()
	Returns a one-line description of the sequence.
Protected Attributes
RAA *	raa
	The database connection of this sequence.
Friends
class	RAA

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Detailed Description

Contains various attributes of a sequence (length, name, species name, genetic code, etc...).

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The documentation for this class was generated from the following file:

• /Users/mgouy/Documents/Bio++/bpp-raa/Bpp/Raa/RaaSeqAttributes.h