Substitution rate and gene expression pattern in mammals

Genes 1301 to 1400

                                                                        
NbT:      number of tissues where ESTs have been detected (in human). 
LgCDS:    length of the aligned protein coding sequences (CDS).       
Ka:       non-synonymous substitution rate.                           
LgS:      number of synonymous sites.                                 
Ks:       synonymous substitution rate.                               
LgSnd:    number of synonymous sites after having removed doublet substitutions.                                                               
Ks_nd:    synonymous substitution rate without doublet substitutions. 
Lg5'UTR:  length of the aligned 5'UTRs (*).                    
K 5'UTR:  substitution rate within 5'UTRs (*).                 
Lg3'UTR:  length of the aligned 3'UTRs (*).                    
K 3'UTR:  substitution rate within 3'UTRs (*).                 
                                                                             
   (*) UTR data from Makalowski and Boguski (1998) Proc. Natl. Acad. Sci. USA 95:9407-9412                                        
   (**) When both rat and mouse orthologs are available, human/rodent substitution rates are calculated using mouse.

					Human / Rodent (**)										Mouse / Rat
	Human acc. num.	Mouse acc. num.	Rat acc. num.	NbT	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd	Lg5'UTR	K 5'UTR	Lg3'UTR	K 3'UTR	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd
1301	U79143 CDS	U03279 CDS	-	2	3204	0.008	1053	0.519	1043	0.494	-	-	-	-	-	-	-	-	-	-
1302	U79294 CDS	-	Y07783 CDS	9	699	0.046	215	0.526	213	0.482	-	-	-	-	-	-	-	-	-	-
1303	U79415 CDS	U89269 CDS	D90404 CDS	11	1386	0.134	359	0.518	348	0.407	-	-	382	0.531	1386	0.051	417	0.150	414	0.134
1304	U79527 CDS	U79525 CDS	-	0	1113	0.115	298	0.505	284	0.379	-	-	-	-	-	-	-	-	-	-
1305	U79716 CDS	U24703 CDS	-	3	10356	0.029	3263	0.524	3192	0.476	-	-	-	-	-	-	-	-	-	-
1306	U80017 CDS	U63294 CDS	-	9	861	0.096	239	0.536	228	0.443	-	-	-	-	-	-	-	-	-	-
1307	U80034 CDS	-	M96633 CDS	2	2112	0.086	599	0.699	576	0.543	-	-	-	-	-	-	-	-	-	-
1308	U81262 CDS	U16819 CDS	-	7	999	0.020	322	0.315	315	0.266	-	-	-	-	-	-	-	-	-	-
1309	U81523 CDS	D83921 CDS	-	1	1092	0.142	286	0.510	277	0.391	-	-	-	-	-	-	-	-	-	-
1310	U81602 CDS	U61112 CDS	-	1	1248	0.038	387	0.326	380	0.283	-	-	-	-	-	-	-	-	-	-
1311	U81787 CDS	U20658 CDS	-	4	1167	0.019	376	0.388	369	0.353	-	-	-	-	-	-	-	-	-	-
1312	U81984 CDS	U81983 CDS	-	3	2607	0.066	765	0.513	749	0.445	-	-	-	-	-	-	-	-	-	-
1313	U82130 CDS	U52945 CDS	-	11	1140	0.029	359	0.389	353	0.359	-	-	-	-	-	-	-	-	-	-
1314	U82256 CDS	U90886 CDS	-	9	1062	0.086	300	0.388	288	0.323	-	-	-	-	-	-	-	-	-	-
1315	U82532 CDS	L42463 CDS	-	1	675	0.134	178	0.453	167	0.338	-	-	-	-	-	-	-	-	-	-
1316	U82535 CDS	U82536 CDS	U72497 CDS	7	1737	0.091	487	0.437	469	0.378	-	-	-	-	1737	0.044	531	0.175	520	0.154
1317	U82671 CDS	U46687 CDS	-	2	1041	0.214	231	0.445	221	0.274	-	-	-	-	-	-	-	-	-	-
1318	U82762 CDS	X83562 CDS	L13445 CDS	2	1125	0.013	366	0.329	365	0.322	-	-	-	-	1125	0.004	372	0.097	372	0.094
1319	U82819 CDS	U69135 CDS	AB010743 CDS	4	927	0.024	297	0.373	295	0.352	-	-	-	-	927	0.006	305	0.178	303	0.170
1320	U82827 CDS	U59322 CDS	-	1	1158	0.009	378	0.386	376	0.372	-	-	-	-	-	-	-	-	-	-
1321	U83192 CDS	D50621 CDS	-	3	2169	0.011	712	0.294	708	0.274	-	-	-	-	-	-	-	-	-	-
1322	U83463 CDS	AF003693 CDS	-	10	894	0.056	268	0.479	265	0.426	-	-	-	-	-	-	-	-	-	-
1323	U83508 CDS	U83509 CDS	-	3	1494	0.012	486	0.355	483	0.341	-	-	-	-	-	-	-	-	-	-
1324	U83867 CDS	-	X90845 CDS	15	7416	0.008	2434	0.543	2396	0.518	-	-	-	-	-	-	-	-	-	-
1325	U83908 CDS	D50465 CDS	-	5	1374	0.022	439	0.464	425	0.400	-	-	-	-	-	-	-	-	-	-
1326	U84401 CDS	-	U84402 CDS	1	2361	0.034	736	0.372	718	0.320	-	-	-	-	-	-	-	-	-	-
1327	U84408 CDS	U84409 CDS	-	0	888	0.109	241	0.551	235	0.444	-	-	-	-	-	-	-	-	-	-
1328	U85946 CDS	-	U79417 CDS	3	2124	0.010	695	0.388	684	0.371	-	-	-	-	-	-	-	-	-	-
1329	U85962 CDS	S66385 CDS	-	4	7311	0.028	2308	0.426	2265	0.384	-	-	-	-	-	-	-	-	-	-
1330	U86136 CDS	U86137 CDS	U89282 CDS	0	7854	0.153	1985	0.494	1871	0.351	-	-	-	-	7836	0.056	2331	0.188	2308	0.155
1331	U87223 CDS	-	U87224 CDS	0	4140	0.032	1294	0.477	1269	0.446	-	-	-	-	-	-	-	-	-	-
1332	U87964 CDS	U87965 CDS	-	3	1749	0.013	567	0.414	557	0.381	-	-	-	-	-	-	-	-	-	-
1333	U87967 CDS	-	U81295 CDS	5	1527	0.154	379	0.571	359	0.414	-	-	-	-	-	-	-	-	-	-
1334	U88317 CDS	L34570 CDS	L06040 CDS	0	1986	0.171	484	0.597	451	0.420	-	-	201	0.526	1986	0.033	619	0.174	616	0.153
1335	U89364 CDS	U70068 CDS	-	2	1722	0.058	519	0.582	508	0.497	-	-	-	-	-	-	-	-	-	-
1336	U89505 CDS	U89506 CDS	-	13	1098	0.049	335	0.171	333	0.132	-	-	-	-	-	-	-	-	-	-
1337	U89867 CDS	S64860 CDS	-	9	1413	0.010	462	0.351	457	0.327	-	-	884	0.170	-	-	-	-	-	-
1338	U89995 CDS	-	Y11321 CDS	0	1101	0.057	327	0.545	317	0.462	-	-	-	-	-	-	-	-	-	-
1339	U90065 CDS	AF033017 CDS	-	5	1008	0.028	316	0.461	311	0.435	-	-	-	-	-	-	-	-	-	-
1340	U90278 CDS	D10651 CDS	M91562 CDS	0	4425	0.022	1422	0.427	1408	0.389	210	0.102	452	0.279	4425	0.016	1439	0.169	1433	0.140
1341	U90313 CDS	U80819 CDS	-	12	720	0.186	173	0.727	163	0.467	-	-	-	-	-	-	-	-	-	-
1342	U90338 CDS	-	U90340 CDS	4	1083	0.053	324	0.486	319	0.461	-	-	-	-	-	-	-	-	-	-
1343	U90878 CDS	-	U23769 CDS	11	981	0.059	289	0.529	280	0.435	-	-	-	-	-	-	-	-	-	-
1344	U91316 CDS	-	D88890 CDS	9	1014	0.041	314	0.495	308	0.446	-	-	-	-	-	-	-	-	-	-
1345	U91328 CDS	U66849 CDS	-	0	1041	0.197	239	0.691	216	0.397	-	-	-	-	-	-	-	-	-	-
1346	U92457 CDS	-	M90518 CDS	1	2736	0.015	885	0.447	885	0.441	-	-	-	-	-	-	-	-	-	-
1347	U92459 CDS	U17252 CDS	-	0	2724	0.013	885	0.356	881	0.345	-	-	-	-	-	-	-	-	-	-
1348	U92971 CDS	U92972 CDS	-	0	1107	0.185	261	0.662	245	0.479	-	-	-	-	-	-	-	-	-	-
1349	U93850 CDS	U93848 CDS	U93849 CDS	1	2172	0.054	653	0.545	634	0.477	-	-	-	-	2172	0.015	701	0.135	699	0.131
1350	U94332 CDS	U94331 CDS	U94330 CDS	3	1203	0.085	341	0.647	328	0.552	-	-	-	-	1200	0.027	378	0.263	379	0.252
1351	U94352 CDS	U94349 CDS	-	9	963	0.100	265	0.504	253	0.380	-	-	-	-	-	-	-	-	-	-
1352	U94585 CDS	U43921 CDS	-	5	1173	0.007	385	0.435	382	0.420	-	-	-	-	-	-	-	-	-	-
1353	U95040 CDS	U67303 CDS	-	17	2490	0.028	782	0.648	759	0.571	-	-	-	-	-	-	-	-	-	-
1354	U95367 CDS	-	U95368 CDS	3	1320	0.038	409	0.423	403	0.389	-	-	-	-	-	-	-	-	-	-
1355	U95626 CDS	U68565 CDS	Y12009 CDS	0	1056	0.110	289	0.478	278	0.389	-	-	-	-	1056	0.039	327	0.127	326	0.101
1356	U96633 CDS	U80078 CDS	U30381 CDS	3	1212	0.019	388	0.388	379	0.344	-	-	-	-	1212	0.012	395	0.160	757	0.125
1357	U55757 CDS	U43678 CDS	-	5	9153	0.091	2567	0.445	2476	0.358	-	-	-	-	-	-	-	-	-	-
1358	X63237 CDS	-	X81839 CDS	19	468	0.002	155	0.423	153	0.393	-	-	-	-	-	-	-	-	-	-
1359	X92963 CDS	X92665 CDS	-	4	579	0.007	191	0.391	191	0.378	-	-	-	-	-	-	-	-	-	-
1360	X98296 CDS	U67874 CDS	-	15	7641	0.013	2484	0.299	2466	0.287	-	-	-	-	-	-	-	-	-	-
1361	Z29328 CDS	U19854 CDS	-	7	549	0.000	183	0.298	181	0.288	-	-	-	-	-	-	-	-	-	-
1362	X57019 CDS	X59560 CDS	-	4	2661	0.069	778	0.473	759	0.401	-	-	-	-	-	-	-	-	-	-
1363	X89398 CDS	Y08975 CDS	-	7	918	0.074	266	0.651	256	0.550	-	-	-	-	-	-	-	-	-	-
1364	X02419 CDS	M17922 CDS	-	2	1293	0.217	298	0.482	278	0.289	-	-	873	0.304	-	-	-	-	-	-
1365	X51952 CDS	U63418 CDS	X12925 CDS	0	921	0.128	242	0.661	229	0.556	-	-	-	-	921	0.017	297	0.233	296	0.224
1366	X96969 CDS	-	U09957 CDS	0	1191	0.040	367	0.445	361	0.407	-	-	-	-	-	-	-	-	-	-
1367	X89267 CDS	U34691 CDS	-	12	1101	0.042	338	0.377	330	0.318	-	-	-	-	-	-	-	-	-	-
1368	Y13645 CDS	U14421 CDS	-	0	552	0.092	156	0.504	143	0.341	-	-	-	-	-	-	-	-	-	-
1369	Y07661 CDS	U12283 CDS	-	6	1038	0.009	339	0.282	337	0.272	-	-	-	-	-	-	-	-	-	-
1370	X55666 CDS	U41741 CDS	AF026476 CDS	1	930	0.009	305	0.426	296	0.388	-	-	-	-	930	0.004	308	0.219	308	0.219
1371	U11087 CDS	-	M86835 CDS	1	1371	0.086	385	0.458	367	0.352	-	-	1034	0.576	-	-	-	-	-	-
1372	X82835 CDS	-	U79568 CDS	1	5919	0.038	1838	0.615	1790	0.555	-	-	-	-	-	-	-	-	-	-
1373	Z46389 CDS	X98475 CDS	-	4	1128	0.064	332	0.390	321	0.282	-	-	-	-	-	-	-	-	-	-
1374	X16316 CDS	X64361 CDS	U39476 CDS	2	2388	0.082	696	0.747	674	0.606	-	-	-	-	2382	0.009	780	0.189	828	0.184
1375	X59812 CDS	-	M38566 CDS	3	1587	0.171	384	0.571	354	0.396	200	0.813	242	0.520	-	-	-	-	-	-
1376	X67482 CDS	D31969 CDS	-	0	1266	0.063	376	0.447	370	0.399	-	-	657	0.461	-	-	-	-	-	-
1377	X79981 CDS	X83930 CDS	-	3	2343	0.151	589	0.510	550	0.335	-	-	-	-	-	-	-	-	-	-
1378	X94216 CDS	U73620 CDS	-	5	1245	0.069	358	0.401	346	0.325	-	-	-	-	-	-	-	-	-	-
1379	X83127 CDS	U65591 CDS	X70662 CDS	3	1203	0.007	394	0.325	391	0.315	-	-	169	0.218	1203	0.006	395	0.140	395	0.140
1380	X58840 CDS	X55842 CDS	-	0	1668	0.024	530	0.336	526	0.316	-	-	408	0.298	-	-	-	-	-	-
1381	X71490 CDS	U21549 CDS	-	7	822	0.004	271	0.504	270	0.498	-	-	-	-	-	-	-	-	-	-
1382	X71491 CDS	U13841 CDS	-	14	678	0.045	210	0.488	211	0.435	-	-	-	-	-	-	-	-	-	-
1383	X62048 CDS	D30743 CDS	D31838 CDS	5	1932	0.056	578	0.479	569	0.407	244	0.455	-	-	1932	0.019	618	0.133	618	0.121
1384	X91249 CDS	U34920 CDS	-	6	1986	0.020	638	0.642	633	0.624	-	-	-	-	-	-	-	-	-	-
1385	X52836 CDS	J04758 CDS	X53501 CDS	0	1332	0.058	400	0.551	393	0.487	-	-	-	-	1332	0.020	426	0.197	425	0.192
1386	X98510 CDS	-	U92802 CDS	1	1125	0.075	323	0.686	311	0.563	-	-	-	-	-	-	-	-	-	-
1387	X71937 CDS	-	U24489 CDS	4	612	0.053	184	0.499	178	0.427	-	-	-	-	-	-	-	-	-	-
1388	X68502 CDS	D50311 CDS	-	2	1032	0.323	211	1.164	180	0.628	-	-	-	-	-	-	-	-	-	-
1389	X65024 CDS	U27398 CDS	-	1	2439	0.148	617	0.559	584	0.411	-	-	-	-	-	-	-	-	-	-
1390	Y07759 CDS	X57377 CDS	-	3	5484	0.018	1767	0.415	1744	0.384	-	-	-	-	-	-	-	-	-	-
1391	Y08374 CDS	X93035 CDS	-	2	1140	0.162	279	0.549	259	0.384	-	-	-	-	-	-	-	-	-	-
1392	Y08564 CDS	U73819 CDS	-	1	1734	0.048	525	0.615	501	0.540	-	-	-	-	-	-	-	-	-	-
1393	Y10807 CDS	-	U60882 CDS	12	1029	0.004	340	0.513	340	0.488	-	-	-	-	-	-	-	-	-	-
1394	Y12815 CDS	Y12879 CDS	-	1	1131	0.179	270	0.645	246	0.446	-	-	-	-	-	-	-	-	-	-
1395	X80507 CDS	X80508 CDS	-	2	1302	0.046	393	0.479	382	0.409	175	0.572	2465	0.364	-	-	-	-	-	-
1396	X79780 CDS	L26528 CDS	-	5	654	0.009	215	0.376	214	0.369	-	-	-	-	-	-	-	-	-	-
1397	Z49107 CDS	U55060 CDS	U59462 CDS	5	966	0.208	223	0.525	213	0.313	-	-	-	-	966	0.092	273	0.212	269	0.174
1398	X95653 CDS	U52951 CDS	-	8	2238	0.009	731	0.330	729	0.327	-	-	-	-	-	-	-	-	-	-
1399	X51435 CDS	L36829 CDS	-	7	8031	0.178	1922	0.710	1787	0.472	-	-	-	-	-	-	-	-	-	-
1400	X95735 CDS	Y07711 CDS	-	12	1686	0.067	494	0.495	479	0.431	-	-	-	-	-	-	-	-	-	-

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