Substitution rate and gene expression pattern in mammals

Genes 1501 to 1600

                                                                        
NbT:      number of tissues where ESTs have been detected (in human). 
LgCDS:    length of the aligned protein coding sequences (CDS).       
Ka:       non-synonymous substitution rate.                           
LgS:      number of synonymous sites.                                 
Ks:       synonymous substitution rate.                               
LgSnd:    number of synonymous sites after having removed doublet substitutions.                                                               
Ks_nd:    synonymous substitution rate without doublet substitutions. 
Lg5'UTR:  length of the aligned 5'UTRs (*).                    
K 5'UTR:  substitution rate within 5'UTRs (*).                 
Lg3'UTR:  length of the aligned 3'UTRs (*).                    
K 3'UTR:  substitution rate within 3'UTRs (*).                 
                                                                             
   (*) UTR data from Makalowski and Boguski (1998) Proc. Natl. Acad. Sci. USA 95:9407-9412                                        
   (**) When both rat and mouse orthologs are available, human/rodent substitution rates are calculated using mouse.

					Human / Rodent (**)										Mouse / Rat
	Human acc. num.	Mouse acc. num.	Rat acc. num.	NbT	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd	Lg5'UTR	K 5'UTR	Lg3'UTR	K 3'UTR	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd
1501	L08424 CDS	M95603 CDS	X53725 CDS	2	693	0.043	213	0.404	214	0.393	409	0.515	214	0.461	693	0.021	223	0.183	222	0.157
1502	J03058 CDS	-	D13978 CDS	5	1383	0.061	414	0.576	407	0.512	-	-	-	-	-	-	-	-	-	-
1503	L35946 CDS	U38940 CDS	U07201 CDS	12	1683	0.032	526	0.529	515	0.481	-	-	-	-	1683	0.015	542	0.215	540	0.200
1504	J05032 CDS	-	U30812 CDS	7	1500	0.028	474	0.386	464	0.332	-	-	412	0.385	-	-	-	-	-	-
1505	M22632 CDS	J02622 CDS	M18467 CDS	12	1290	0.024	408	0.455	400	0.415	-	-	910	0.339	1290	0.007	423	0.183	423	0.178
1506	L19871 CDS	U19118 CDS	M63282 CDS	6	543	0.026	172	0.462	167	0.402	169	0.400	1128	0.394	543	0.006	179	0.150	179	0.150
1507	J05096 CDS	-	M14512 CDS	5	3060	0.005	1011	0.426	1000	0.411	-	-	-	-	-	-	-	-	-	-
1508	L42563 CDS	-	M90398 CDS	1	3108	0.076	895	0.506	854	0.420	-	-	-	-	-	-	-	-	-	-
1509	L09235 CDS	U13837 CDS	-	8	1851	0.015	597	0.494	583	0.447	-	-	-	-	-	-	-	-	-	-
1510	M81181 CDS	X56007 CDS	U45946 CDS	3	870	0.018	279	0.417	276	0.388	391	0.221	424	0.414	870	0.013	282	0.207	281	0.204
1511	L06133 CDS	U71091 CDS	U59245 CDS	2	4473	0.056	1333	0.377	1304	0.328	-	-	310	0.346	4473	0.016	1442	0.160	1438	0.154
1512	M55105 CDS	-	D00189 CDS	3	3039	0.005	1002	0.484	995	0.472	-	-	-	-	-	-	-	-	-	-
1513	D28126 CDS	L01062 CDS	J05266 CDS	14	1659	0.013	539	0.495	527	0.460	-	-	-	-	1629	0.009	535	0.291	529	0.273
1514	L46720 CDS	-	D28560 CDS	8	2580	0.044	793	0.598	768	0.496	-	-	-	-	-	-	-	-	-	-
1515	L21181 CDS	U37186 CDS	L20900 CDS	5	1434	0.062	426	0.466	413	0.367	175	0.448	-	-	1434	0.024	454	0.197	452	0.183
1516	L38961 CDS	L34260 CDS	-	7	2115	0.007	694	0.331	694	0.325	-	-	231	0.166	-	-	-	-	-	-
1517	M57730 CDS	D38146 CDS	D38056 CDS	7	615	0.085	175	0.350	167	0.272	-	-	-	-	615	0.016	199	0.021	199	0.012
1518	M92357 CDS	L24118 CDS	-	3	1938	0.165	470	0.420	440	0.287	154	0.320	1421	0.599	-	-	-	-	-	-
1519	M34175 CDS	-	M34176 CDS	10	2811	0.000	937	0.342	929	0.333	-	-	2375	0.433	-	-	-	-	-	-
1520	L22473 CDS	L22472 CDS	U49729 CDS	2	576	0.041	177	0.351	177	0.330	-	-	-	-	576	0.003	191	0.026	190	0.021
1521	M14745 CDS	L31532 CDS	L14680 CDS	0	708	0.073	209	0.365	205	0.280	-	-	-	-	708	0.027	223	0.101	220	0.067
1522	M20471 CDS	-	M15882 CDS	15	744	0.011	243	0.337	243	0.334	-	-	262	0.068	-	-	-	-	-	-
1523	M27507 CDS	M75122 CDS	-	14	1935	0.150	501	0.547	469	0.383	-	-	314	0.654	-	-	-	-	-	-
1524	M37762 CDS	X55573 CDS	M61178 CDS	1	741	0.017	240	0.326	238	0.310	-	-	-	-	741	0.004	245	0.077	247	0.080
1525	D16593 CDS	-	D12573 CDS	3	579	0.006	191	0.393	188	0.360	-	-	222	0.336	-	-	-	-	-	-
1526	L13939 CDS	-	M77245 CDS	2	2838	0.019	912	0.408	902	0.398	-	-	752	0.555	-	-	-	-	-	-
1527	M64554 CDS	D10071 CDS	-	1	1983	0.136	509	0.558	478	0.416	-	-	-	-	-	-	-	-	-	-
1528	M65153 CDS	L20276 CDS	U17834 CDS	6	1104	0.024	350	0.479	341	0.411	-	-	-	-	1104	0.004	365	0.104	366	0.104
1529	M76665 CDS	X83202 CDS	-	3	876	0.137	226	0.644	214	0.475	-	-	-	-	-	-	-	-	-	-
1530	L13689 CDS	M64067 CDS	-	7	972	0.012	316	0.312	314	0.304	506	0.147	1663	0.165	-	-	-	-	-	-
1531	M22489 CDS	L25602 CDS	Z25868 CDS	3	1182	0.046	360	0.492	350	0.436	-	-	-	-	1179	0.023	375	0.190	372	0.167
1532	M22490 CDS	D14814 CDS	Z22607 CDS	6	1221	0.016	395	0.286	390	0.256	394	0.163	-	-	1221	0.007	401	0.144	402	0.139
1533	M22491 CDS	-	D63860 CDS	0	1395	0.104	380	0.676	357	0.505	309	0.634	-	-	-	-	-	-	-	-
1534	M57965 CDS	-	X15939 CDS	4	5805	0.014	1880	0.344	1866	0.320	-	-	-	-	-	-	-	-	-	-
1535	L24759 CDS	L20232 CDS	-	0	945	0.197	226	0.698	220	0.446	-	-	-	-	-	-	-	-	-	-
1536	M23068 CDS	X13586 CDS	-	3	777	0.039	239	0.479	231	0.401	-	-	-	-	-	-	-	-	-	-
1537	M62843 CDS	D31953 CDS	S83320 CDS	2	1140	0.006	376	0.266	376	0.249	-	-	226	0.079	1119	0.000	373	0.046	373	0.046
1538	L78833 CDS	U31625 CDS	-	1	5397	0.294	1040	0.438	964	0.231	-	-	-	-	-	-	-	-	-	-
1539	D16227 CDS	-	D13126 CDS	3	579	0.018	187	0.360	183	0.313	-	-	-	-	-	-	-	-	-	-
1540	M96944 CDS	M97013 CDS	-	0	1173	0.003	388	0.331	386	0.326	-	-	-	-	-	-	-	-	-	-
1541	D31716 CDS	-	D12769 CDS	5	732	0.015	236	0.173	235	0.170	509	0.192	1387	0.252	-	-	-	-	-	-
1542	D83542 CDS	M74541 CDS	-	2	2343	0.087	669	0.650	638	0.507	-	-	-	-	-	-	-	-	-	-
1543	L09708 CDS	M60579 CDS	-	6	2223	0.154	561	0.594	523	0.416	-	-	-	-	-	-	-	-	-	-
1544	L41415 CDS	U19265 CDS	S79797 CDS	0	1284	0.089	363	0.627	340	0.467	219	0.723	543	0.473	1284	0.033	397	0.206	392	0.184
1545	K02765 CDS	K02782 CDS	X52477 CDS	14	4980	0.137	1283	0.650	1201	0.474	-	-	-	-	4977	0.051	1496	0.208	1484	0.182
1546	M29964 CDS	-	Z50052 CDS	4	747	0.230	166	0.528	154	0.290	-	-	-	-	-	-	-	-	-	-
1547	L34059 CDS	D14888 CDS	-	2	2739	0.046	833	0.711	803	0.622	-	-	254	0.551	-	-	-	-	-	-
1548	D31784 CDS	-	D25290 CDS	0	2367	0.023	757	0.448	752	0.414	-	-	1014	0.400	-	-	-	-	-	-
1549	L34060 CDS	X95600 CDS	-	3	2376	0.018	766	0.359	757	0.336	-	-	-	-	-	-	-	-	-	-
1550	M94172 CDS	U04999 CDS	M92905 CDS	1	6843	0.049	2082	0.549	2026	0.464	152	0.359	208	0.441	6816	0.019	2190	0.183	2183	0.164
1551	M76559 CDS	U73484 CDS	-	1	3273	0.020	1050	0.446	1032	0.411	-	-	278	0.334	-	-	-	-	-	-
1552	L07738 CDS	-	Y09453 CDS	1	666	0.109	185	0.636	178	0.498	-	-	-	-	-	-	-	-	-	-
1553	M77181 CDS	M81022 CDS	U60578 CDS	6	780	0.116	209	0.620	197	0.494	-	-	687	0.405	780	0.042	241	0.128	240	0.115
1554	M29458 CDS	M27796 CDS	M22413 CDS	3	780	0.054	235	0.508	232	0.483	-	-	-	-	780	0.029	244	0.243	243	0.218
1555	M83670 CDS	U37091 CDS	S68245 CDS	1	915	0.334	172	0.703	151	0.322	-	-	-	-	915	0.150	228	0.235	223	0.156
1556	M33987 CDS	L36655 CDS	-	4	783	0.136	204	0.511	192	0.388	-	-	387	0.481	-	-	-	-	-	-
1557	L14778 CDS	J05479 CDS	D90035 CDS	5	1563	0.002	519	0.340	519	0.340	-	-	538	0.070	1563	0.000	521	0.145	521	0.145
1558	L18887 CDS	L18888 CDS	-	12	1770	0.036	550	0.430	540	0.380	-	-	-	-	-	-	-	-	-	-
1559	M33336 CDS	-	M17086 CDS	14	1143	0.013	371	0.568	361	0.504	-	-	192	0.191	-	-	-	-	-	-
1560	M23254 CDS	Y10139 CDS	-	9	2100	0.037	653	0.516	647	0.478	-	-	854	0.403	-	-	-	-	-	-
1561	L39211 CDS	-	U88294 CDS	1	2319	0.075	667	0.871	637	0.731	-	-	-	-	-	-	-	-	-	-
1562	L19297 CDS	X51971 CDS	U12268 CDS	1	894	0.207	211	0.778	190	0.515	-	-	-	-	891	0.082	256	0.210	253	0.170
1563	L12579 CDS	U68542 CDS	-	5	2028	0.037	631	0.446	611	0.383	-	-	-	-	-	-	-	-	-	-
1564	M63138 CDS	X68378 CDS	X54467 CDS	6	1230	0.123	331	0.668	320	0.531	-	-	632	0.590	1221	0.044	373	0.170	372	0.150
1565	M90696 CDS	AJ002386 CDS	L03201 CDS	6	984	0.176	242	0.556	232	0.351	-	-	310	0.713	984	0.090	275	0.243	274	0.168
1566	M37197 CDS	U19891 CDS	-	6	2964	0.136	779	0.643	736	0.434	-	-	-	-	-	-	-	-	-	-
1567	L40992 CDS	D14636 CDS	-	1	1320	0.006	435	0.254	436	0.250	-	-	-	-	-	-	-	-	-	-
1568	M62420 CDS	U31966 CDS	-	6	831	0.078	240	0.608	232	0.548	-	-	-	-	-	-	-	-	-	-
1569	M57729 CDS	M35525 CDS	-	2	5022	0.128	1307	0.534	1249	0.401	-	-	-	-	-	-	-	-	-	-
1570	L09230 CDS	U29678 CDS	-	1	1065	0.127	283	0.821	256	0.585	-	-	-	-	-	-	-	-	-	-
1571	M90813 CDS	M86182 CDS	L09752 CDS	4	864	0.042	265	0.374	263	0.344	-	-	511	0.297	864	0.006	284	0.100	283	0.097
1572	M90814 CDS	U43844 CDS	D16309 CDS	1	876	0.026	277	0.331	271	0.289	-	-	866	0.353	876	0.006	288	0.145	286	0.136
1573	M84371 CDS	M62553 CDS	-	1	1635	0.207	366	0.556	347	0.356	-	-	383	0.626	-	-	-	-	-	-
1574	L23419 CDS	M62541 CDS	-	0	870	0.147	215	0.397	209	0.295	-	-	327	0.553	-	-	-	-	-	-
1575	M37815 CDS	M34563 CDS	X55288 CDS	1	648	-	-	-	-	-	-	-	695	0.325	648	0.055	195	0.285	196	0.239
1576	L09753 CDS	L09754 CDS	-	0	699	0.160	166	0.564	154	0.362	-	-	932	0.702	-	-	-	-	-	-
1577	M83554 CDS	U25416 CDS	D42117 CDS	0	1485	0.294	292	0.626	265	0.337	-	-	-	-	1470	0.095	415	0.213	411	0.157
1578	M23197 CDS	S71403 CDS	-	2	996	0.397	179	0.977	148	0.458	-	-	-	-	-	-	-	-	-	-
1579	M81945 CDS	S69299 CDS	-	5	1140	0.225	248	0.481	235	0.303	-	-	-	-	-	-	-	-	-	-
1580	M60871 CDS	X97227 CDS	M57276 CDS	4	657	0.104	182	0.536	176	0.417	-	-	700	0.576	657	0.038	200	0.173	198	0.148
1581	L27587 CDS	J03857 CDS	AB004831 CDS	1	681	0.221	156	0.593	146	0.426	-	-	-	-	681	0.080	194	0.162	191	0.130
1582	M81933 CDS	U27323 CDS	-	2	1536	0.096	433	0.478	423	0.366	233	0.309	323	0.343	-	-	-	-	-	-
1583	M81934 CDS	S93521 CDS	-	7	1689	0.101	462	0.586	448	0.467	226	0.396	793	0.476	-	-	-	-	-	-
1584	L26584 CDS	L20899 CDS	X67241 CDS	1	3762	0.084	1063	0.544	1029	0.473	-	-	-	-	3711	0.047	1122	0.242	1109	0.211
1585	M34065 CDS	L16926 CDS	-	3	1383	0.277	282	0.597	270	0.324	-	-	-	-	-	-	-	-	-	-
1586	L25610 CDS	U24173 CDS	-	5	477	-	-	-	-	-	-	-	179	0.417	-	-	-	-	-	-
1587	D70899 CDS	L12460 CDS	-	0	2286	0.024	729	0.546	718	0.508	-	-	-	-	-	-	-	-	-	-
1588	D30742 CDS	X58995 CDS	-	0	1398	0.112	382	0.431	369	0.302	-	-	-	-	-	-	-	-	-	-
1589	M94579 CDS	U33169 CDS	-	1	1794	0.128	475	0.642	449	0.486	-	-	-	-	-	-	-	-	-	-
1590	M95724 CDS	U03113 CDS	-	5	2700	0.360	481	0.562	429	0.295	-	-	-	-	-	-	-	-	-	-
1591	M13699 CDS	U49430 CDS	L33869 CDS	4	3180	0.096	888	0.465	859	0.378	-	-	-	-	3174	0.059	941	0.229	930	0.166
1592	M55131 CDS	M69298 CDS	-	2	4425	0.132	1159	0.559	1102	0.428	167	0.556	1486	0.394	-	-	-	-	-	-
1593	J02933 CDS	U66079 CDS	-	0	1332	0.188	314	0.650	296	0.429	-	-	-	-	-	-	-	-	-	-
1594	L25616 CDS	L43326 CDS	-	14	3795	0.096	1042	0.466	1021	0.380	-	-	-	-	-	-	-	-	-	-
1595	M84741 CDS	U19717 CDS	-	4	2043	0.060	612	0.534	592	0.448	-	-	-	-	-	-	-	-	-	-
1596	M26061 CDS	X60664 CDS	-	1	2577	0.032	811	0.581	804	0.530	-	-	222	1.045	-	-	-	-	-	-
1597	M32391 CDS	M99492 CDS	-	4	1806	0.123	477	0.697	450	0.520	-	-	-	-	-	-	-	-	-	-
1598	M95767 CDS	-	M95768 CDS	3	1101	0.114	296	0.573	288	0.451	-	-	448	0.494	-	-	-	-	-	-
1599	M35128 CDS	J04192 CDS	M16406 CDS	1	1380	0.013	451	0.397	445	0.360	-	-	-	-	1380	0.008	455	0.138	451	0.116
1600	M64269 CDS	M68898 CDS	-	0	741	0.200	182	0.515	177	0.363	-	-	-	-	-	-	-	-	-	-

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