Substitution rate and gene expression pattern in mammals

Genes 201 to 300

                                                                        
NbT:      number of tissues where ESTs have been detected (in human). 
LgCDS:    length of the aligned protein coding sequences (CDS).       
Ka:       non-synonymous substitution rate.                           
LgS:      number of synonymous sites.                                 
Ks:       synonymous substitution rate.                               
LgSnd:    number of synonymous sites after having removed doublet substitutions.                                                               
Ks_nd:    synonymous substitution rate without doublet substitutions. 
Lg5'UTR:  length of the aligned 5'UTRs (*).                    
K 5'UTR:  substitution rate within 5'UTRs (*).                 
Lg3'UTR:  length of the aligned 3'UTRs (*).                    
K 3'UTR:  substitution rate within 3'UTRs (*).                 
                                                                             
   (*) UTR data from Makalowski and Boguski (1998) Proc. Natl. Acad. Sci. USA 95:9407-9412                                        
   (**) When both rat and mouse orthologs are available, human/rodent substitution rates are calculated using mouse.

					Human / Rodent (**)										Mouse / Rat
	Human acc. num.	Mouse acc. num.	Rat acc. num.	NbT	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd	Lg5'UTR	K 5'UTR	Lg3'UTR	K 3'UTR	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd
201	X61123 CDS	Z16410 CDS	L26268 CDS	14	513	0.000	171	0.126	171	0.126	324	0.191	937	0.092	513	0.002	170	0.047	170	0.047
202	X93086 CDS	-	M81681 CDS	8	885	0.107	244	0.492	228	0.364	-	-	-	-	-	-	-	-	-	-
203	X54486 CDS	Y10386 CDS	-	16	1494	0.213	342	0.608	320	0.365	-	-	-	-	-	-	-	-	-	-
204	X57250 CDS	S46665 CDS	AB003042 CDS	0	1041	0.229	228	0.828	212	0.524	-	-	-	-	1038	0.134	274	0.240	268	0.153
205	X02176 CDS	X05475 CDS	U49071 CDS	1	1563	0.260	324	0.610	297	0.356	-	-	-	-	1563	0.175	378	0.237	375	0.157
206	X06661 CDS	D26352 CDS	M27839 CDS	2	783	0.006	257	0.311	256	0.308	-	-	1319	0.427	783	0.004	258	0.185	258	0.185
207	Y00811 CDS	M81591 CDS	M15944 CDS	2	2250	0.031	704	0.356	695	0.335	-	-	166	0.611	2247	0.008	737	0.156	737	0.156
208	X56667 CDS	-	X66974 CDS	3	813	0.006	267	0.442	263	0.432	-	-	544	0.325	-	-	-	-	-	-
209	Z20656 CDS	M76598 CDS	X15938 CDS	5	5814	0.015	1880	0.348	1855	0.320	-	-	-	-	5811	0.006	1914	0.189	1903	0.178
210	X04366 CDS	AF021847 CDS	U53858 CDS	8	2139	0.059	636	0.547	619	0.475	-	-	-	-	2139	0.009	700	0.196	698	0.185
211	X92669 CDS	U35249 CDS	-	9	927	0.026	294	0.585	278	0.501	-	-	-	-	-	-	-	-	-	-
212	X51405 CDS	U23184 CDS	L07281 CDS	12	1428	0.017	460	0.607	458	0.569	-	-	-	-	1413	0.044	439	0.248	432	0.163
213	X04085 CDS	X52108 CDS	M25680 CDS	10	1581	0.053	472	0.579	466	0.530	-	-	598	0.429	1581	0.026	502	0.181	499	0.168
214	X16832 CDS	U06119 CDS	Y00708 CDS	10	999	0.099	275	0.614	263	0.447	-	-	373	0.555	999	0.038	310	0.178	308	0.154
215	Z18951 CDS	U07645 CDS	Z46614 CDS	7	534	0.031	167	0.253	165	0.222	-	-	-	-	531	0.062	161	0.206	160	0.147
216	X74328 CDS	U21681 CDS	-	1	1041	0.095	287	0.562	275	0.458	-	-	-	-	-	-	-	-	-	-
217	X57110 CDS	X57111 CDS	-	0	2658	0.035	824	0.442	807	0.379	-	-	-	-	-	-	-	-	-	-
218	X85740 CDS	X90862 CDS	-	0	1080	0.077	309	0.693	292	0.549	-	-	-	-	-	-	-	-	-	-
219	U23430 CDS	D85605 CDS	D50608 CDS	0	1284	0.051	388	0.561	378	0.485	-	-	-	-	1275	0.018	409	0.136	408	0.115
220	X06882 CDS	M34510 CDS	U51804 CDS	14	1098	0.230	244	0.658	222	0.458	-	-	-	-	1095	0.100	301	0.165	295	0.117
221	X14974 CDS	M63695 CDS	D26439 CDS	2	1002	0.248	205	0.514	192	0.360	-	-	675	0.472	999	0.088	276	0.221	273	0.149
222	X69397 CDS	X72910 CDS	-	10	228	-	-	-	-	-	-	-	1486	0.299	-	-	-	-	-	-
223	X07871 CDS	M19807 CDS	-	1	1026	0.365	178	0.708	154	0.309	-	-	-	-	-	-	-	-	-	-
224	X14046 CDS	U18372 CDS	X53517 CDS	5	843	0.113	225	0.527	218	0.416	-	-	193	0.507	843	0.012	274	0.137	274	0.137
225	X67878 CDS	X65453 CDS	-	0	780	0.136	201	0.437	193	0.336	-	-	448	0.288	-	-	-	-	-	-
226	Y00805 CDS	M26446 CDS	X04310 CDS	1	624	-	-	-	-	-	-	-	591	0.548	615	0.141	156	0.200	149	0.139
227	Y00272 CDS	X16461 CDS	-	5	891	0.021	286	0.755	277	0.701	-	-	-	-	-	-	-	-	-	-
228	X62071 CDS	U63337 CDS	-	2	891	0.008	292	0.296	292	0.280	160	0.559	317	0.594	-	-	-	-	-	-
229	U80055 CDS	-	D83481 CDS	6	600	0.047	184	0.438	178	0.381	178	0.824	653	0.444	-	-	-	-	-	-
230	X60592 CDS	M94126 CDS	-	3	822	0.259	172	0.797	153	0.420	-	-	-	-	-	-	-	-	-	-
231	X84213 CDS	Y13231 CDS	-	0	624	0.130	160	0.592	150	0.467	-	-	-	-	-	-	-	-	-	-
232	X55039 CDS	X55038 CDS	-	2	1788	0.042	548	0.426	531	0.360	-	-	-	-	-	-	-	-	-	-
233	X55074 CDS	X51983 CDS	-	3	1230	0.005	405	0.170	404	0.168	310	0.155	508	0.184	-	-	-	-	-	-
234	X14798 CDS	X53953 CDS	L20681 CDS	0	1320	0.013	428	0.329	425	0.300	297	0.631	-	-	1320	0.008	433	0.122	431	0.114
235	X66142 CDS	X55968 CDS	-	3	2559	0.039	789	0.713	765	0.619	-	-	167	0.416	-	-	-	-	-	-
236	U32370 CDS	U48896 CDS	L21698 CDS	0	1623	0.036	504	0.353	500	0.338	-	-	-	-	1623	0.019	523	0.126	523	0.125
237	U03749 CDS	M64278 CDS	-	2	1293	0.185	306	0.702	292	0.440	-	-	347	0.303	-	-	-	-	-	-
238	Z46376 CDS	Y11666 CDS	M68971 CDS	1	2751	0.033	863	0.539	851	0.493	-	-	-	-	2751	0.004	909	0.185	907	0.182
239	X78121 CDS	-	L13722 CDS	1	1941	0.093	542	0.386	532	0.318	-	-	-	-	-	-	-	-	-	-
240	Z25587 CDS	-	X62894 CDS	0	2955	0.063	872	0.476	848	0.397	-	-	-	-	-	-	-	-	-	-
241	X80693 CDS	-	U77582 CDS	10	972	0.003	322	0.211	323	0.211	-	-	-	-	-	-	-	-	-	-
242	X15334 CDS	M74149 CDS	M18668 CDS	14	1143	0.020	368	0.380	363	0.355	-	-	-	-	1143	0.005	376	0.208	376	0.203
243	X70251 CDS	U17112 CDS	-	9	1173	0.016	377	0.206	374	0.190	-	-	201	0.142	-	-	-	-	-	-
244	X57152 CDS	X80685 CDS	L15619 CDS	13	645	0.000	215	0.300	215	0.300	167	0.238	-	-	645	0.000	215	0.190	215	0.190
245	X68277 CDS	S64851 CDS	U02553 CDS	12	1101	0.017	354	0.422	354	0.422	161	0.559	644	0.174	1101	0.014	358	0.181	355	0.166
246	Z22555 CDS	U37799 CDS	U76205 CDS	6	1527	0.118	404	0.707	373	0.563	-	-	-	-	1527	0.042	470	0.272	466	0.250
247	Z67743 CDS	-	Z67744 CDS	2	2361	0.020	756	0.558	743	0.527	-	-	-	-	-	-	-	-	-	-
248	X78520 CDS	X78874 CDS	D17521 CDS	5	2280	0.002	757	0.337	750	0.323	-	-	-	-	2280	0.001	758	0.141	757	0.138
249	X91906 CDS	-	Z56277 CDS	0	2238	0.009	733	0.374	727	0.354	162	0.616	-	-	-	-	-	-	-	-
250	X77197 CDS	Z49916 CDS	Z36944 CDS	4	2241	0.016	727	0.589	719	0.560	-	-	-	-	2241	0.009	735	0.185	735	0.184
251	X99832 CDS	U47106 CDS	-	11	1314	0.089	372	0.622	349	0.523	-	-	-	-	-	-	-	-	-	-
252	X96395 CDS	-	D86086 CDS	3	4623	0.139	1195	0.514	1121	0.369	-	-	-	-	-	-	-	-	-	-
253	X60542 CDS	U05342 CDS	X17457 CDS	0	594	0.115	162	0.440	159	0.323	-	-	-	-	594	0.024	188	0.071	188	0.071
254	X81334 CDS	X66473 CDS	M60616 CDS	1	1413	0.073	408	0.563	399	0.495	-	-	1235	0.461	1395	0.017	449	0.168	450	0.163
255	X61598 CDS	D12907 CDS	M69246 CDS	5	1251	0.016	403	0.321	401	0.313	-	-	630	0.442	1251	0.004	413	0.174	411	0.163
256	Z26491 CDS	AF076156 CDS	Z12651 CDS	13	792	0.139	207	0.728	195	0.585	-	-	-	-	789	0.041	241	0.202	240	0.174
257	X62891 CDS	M88354 CDS	X59496 CDS	0	492	-	-	-	-	-	-	-	-	-	492	0.032	153	0.202	157	0.167
258	X16155 CDS	X74134 CDS	-	6	1251	0.003	415	0.202	416	0.199	-	-	-	-	-	-	-	-	-	-
259	X15822 CDS	X58486 CDS	-	15	249	-	-	-	-	-	-	-	177	0.224	-	-	-	-	-	-
260	X16560 CDS	X52940 CDS	-	17	189	-	-	-	-	-	-	-	153	0.273	-	-	-	-	-	-
261	X52851 CDS	X52803 CDS	M19533 CDS	18	492	0.018	158	0.282	157	0.259	-	-	222	0.181	492	0.012	160	0.078	160	0.078
262	X72304 CDS	X72305 CDS	U53498 CDS	2	1245	0.013	405	0.355	400	0.335	-	-	-	-	1245	0.008	409	0.164	407	0.154
263	X58022 CDS	-	AF003904 CDS	4	966	0.090	271	0.496	262	0.390	-	-	-	-	-	-	-	-	-	-
264	X59656 CDS	X90648 CDS	-	0	909	0.017	292	0.376	292	0.376	-	-	-	-	-	-	-	-	-	-
265	Z66539 CDS	-	X66494 CDS	11	1905	0.009	625	0.324	621	0.314	-	-	-	-	-	-	-	-	-	-
266	U72404 CDS	M60559 CDS	X16072 CDS	1	615	0.016	199	0.507	197	0.494	-	-	-	-	615	0.039	189	0.331	188	0.266
267	U95018 CDS	D88792 CDS	U44948 CDS	8	579	0.003	192	0.369	190	0.352	-	-	-	-	579	0.002	192	0.151	192	0.140
268	U43033 CDS	U18366 CDS	D78591 CDS	0	603	0.138	158	0.394	151	0.307	-	-	611	0.677	603	0.034	189	0.160	189	0.132
269	X90780 CDS	Z22784 CDS	U77354 CDS	4	630	0.041	195	0.425	192	0.368	-	-	-	-	630	0.004	208	0.207	209	0.205
270	X52142 CDS	U49350 CDS	-	3	1773	0.015	572	0.419	568	0.400	-	-	-	-	-	-	-	-	-	-
271	X68303 CDS	Z26580 CDS	-	6	1263	0.076	369	0.462	352	0.377	-	-	231	0.293	-	-	-	-	-	-
272	Z36714 CDS	U20612 CDS	-	1	2331	0.101	643	0.515	616	0.399	-	-	436	0.589	-	-	-	-	-	-
273	X60114 CDS	U05247 CDS	X58631 CDS	5	1350	0.008	443	0.447	435	0.408	-	-	647	0.200	1350	0.005	446	0.107	446	0.105
274	X05367 CDS	-	M63133 CDS	5	1551	0.143	397	0.589	367	0.423	-	-	154	0.573	-	-	-	-	-	-
275	U51692 CDS	-	AB004096 CDS	3	1509	0.037	468	0.561	456	0.510	-	-	-	-	-	-	-	-	-	-
276	X52426 CDS	U13921 CDS	-	2	1236	0.063	369	0.373	359	0.322	-	-	277	0.307	-	-	-	-	-	-
277	X73501 CDS	-	M63665 CDS	1	1266	0.107	345	0.598	328	0.481	-	-	-	-	-	-	-	-	-	-
278	X55760 CDS	-	S46131 CDS	0	1335	0.052	403	0.542	391	0.460	-	-	636	0.384	-	-	-	-	-	-
279	X13227 CDS	D10210 CDS	AB003400 CDS	0	1038	0.113	279	0.541	269	0.427	-	-	-	-	1038	0.032	323	0.228	321	0.215
280	X78212 CDS	-	X73911 CDS	5	2235	0.118	610	0.576	575	0.430	-	-	-	-	-	-	-	-	-	-
281	X13256 CDS	S50200 CDS	L12407 CDS	0	1809	0.132	479	0.640	455	0.471	-	-	-	-	1809	0.075	525	0.202	533	0.178
282	X76132 CDS	X85788 CDS	U68725 CDS	1	4341	0.017	1396	0.423	1374	0.393	-	-	-	-	4335	0.006	1428	0.201	1425	0.194
283	X51362 CDS	X55674 CDS	X56065 CDS	0	1329	0.024	424	0.357	422	0.336	165	0.249	1016	0.438	1329	0.000	443	0.114	444	0.113
284	Z34522 CDS	X97986 CDS	-	0	2655	0.099	728	0.542	698	0.440	-	-	-	-	-	-	-	-	-	-
285	U13061 CDS	L27121 CDS	J02643 CDS	2	855	0.244	185	0.800	170	0.413	-	-	-	-	855	0.002	284	0.000	284	0.000
286	X00855 CDS	J00387 CDS	-	3	561	0.050	168	0.391	166	0.336	-	-	-	-	-	-	-	-	-	-
287	X62535 CDS	AF085219 CDS	S49760 CDS	6	2178	0.095	606	0.517	580	0.410	-	-	230	0.331	2178	0.035	672	0.215	666	0.191
288	Z12172 CDS	Z12171 CDS	U25680 CDS	4	1149	0.082	329	0.344	319	0.256	-	-	-	-	1146	0.031	358	0.110	353	0.092
289	U47011 CDS	Z48746 CDS	-	0	612	0.000	204	0.232	204	0.232	-	-	-	-	-	-	-	-	-	-
290	X91233 CDS	U14332 CDS	U69272 CDS	1	486	-	-	-	-	-	-	-	-	-	486	0.025	155	0.131	155	0.126
291	Z28339 CDS	-	D17309 CDS	2	975	0.137	259	0.470	245	0.314	-	-	1571	0.645	-	-	-	-	-	-
292	U10526 CDS	-	U38801 CDS	12	1005	0.025	319	0.484	314	0.432	-	-	-	-	-	-	-	-	-	-
293	U13735 CDS	U12620 CDS	-	5	2280	0.085	647	0.389	625	0.292	-	-	900	0.203	-	-	-	-	-	-
294	X68302 CDS	M64228 CDS	X16476 CDS	3	2571	0.034	801	0.603	785	0.561	-	-	-	-	2559	0.013	830	0.195	828	0.189
295	U47677 CDS	L21973 CDS	-	0	1290	0.088	369	0.447	358	0.321	-	-	498	0.354	-	-	-	-	-	-
296	X64318 CDS	U83148 CDS	-	9	1386	0.085	390	1.042	371	0.810	-	-	-	-	-	-	-	-	-	-
297	X12794 CDS	X76654 CDS	-	3	1167	0.029	369	0.545	362	0.474	196	0.256	349	0.471	-	-	-	-	-	-
298	X91922 CDS	-	D29683 CDS	4	2262	0.027	717	0.457	707	0.418	-	-	-	-	-	-	-	-	-	-
299	U65938 CDS	L33416 CDS	-	10	1617	0.182	375	0.418	361	0.286	-	-	-	-	-	-	-	-	-	-
300	X51466 CDS	-	Y07504 CDS	11	2574	0.004	851	0.698	837	0.659	-	-	-	-	-	-	-	-	-	-

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