Substitution rate and gene expression pattern in mammals

Genes 301 to 400

                                                                        
NbT:      number of tissues where ESTs have been detected (in human). 
LgCDS:    length of the aligned protein coding sequences (CDS).       
Ka:       non-synonymous substitution rate.                           
LgS:      number of synonymous sites.                                 
Ks:       synonymous substitution rate.                               
LgSnd:    number of synonymous sites after having removed doublet substitutions.                                                               
Ks_nd:    synonymous substitution rate without doublet substitutions. 
Lg5'UTR:  length of the aligned 5'UTRs (*).                    
K 5'UTR:  substitution rate within 5'UTRs (*).                 
Lg3'UTR:  length of the aligned 3'UTRs (*).                    
K 3'UTR:  substitution rate within 3'UTRs (*).                 
                                                                             
   (*) UTR data from Makalowski and Boguski (1998) Proc. Natl. Acad. Sci. USA 95:9407-9412                                        
   (**) When both rat and mouse orthologs are available, human/rodent substitution rates are calculated using mouse.

					Human / Rodent (**)										Mouse / Rat
	Human acc. num.	Mouse acc. num.	Rat acc. num.	NbT	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd	Lg5'UTR	K 5'UTR	Lg3'UTR	K 3'UTR	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd
301	X70940 CDS	L26479 CDS	M62752 CDS	4	1389	0.001	462	0.675	459	0.671	-	-	-	-	1389	0.003	461	0.177	461	0.172
302	X00588 CDS	X78987 CDS	-	10	3624	0.054	1093	0.615	1058	0.549	-	-	-	-	-	-	-	-	-	-
303	X04571 CDS	V00741 CDS	-	0	3588	0.211	805	0.543	749	0.341	322	0.417	736	0.484	-	-	-	-	-	-
304	X95648 CDS	-	L41679 CDS	9	915	0.043	283	0.503	278	0.472	-	-	512	0.566	-	-	-	-	-	-
305	X81479 CDS	U66888 CDS	-	1	2640	0.214	604	0.682	549	0.395	-	-	-	-	-	-	-	-	-	-
306	X51956 CDS	X52380 CDS	X07727 CDS	6	1302	0.008	428	0.356	424	0.346	-	-	904	0.363	1302	0.007	427	0.158	424	0.147
307	X56832 CDS	X61600 CDS	Y00979 CDS	7	1302	0.011	424	0.468	418	0.442	-	-	-	-	1302	0.019	421	0.209	420	0.201
308	X16288 CDS	X52379 CDS	X02610 CDS	17	1302	0.027	410	0.494	407	0.477	-	-	357	0.516	1302	0.020	417	0.170	414	0.156
309	X98126 CDS	-	X15958 CDS	10	870	0.074	252	0.556	245	0.506	-	-	-	-	-	-	-	-	-	-
310	X85116 CDS	X91043 CDS	-	8	852	0.066	250	0.697	244	0.581	-	-	-	-	-	-	-	-	-	-
311	X97024 CDS	L05781 CDS	X65083 CDS	8	1659	0.163	406	0.554	381	0.416	-	-	306	0.651	1659	0.039	509	0.148	506	0.136
312	X04707 CDS	S62756 CDS	-	1	1368	0.022	436	0.441	432	0.423	244	0.454	-	-	-	-	-	-	-	-
313	X78669 CDS	-	U15734 CDS	9	951	0.044	293	0.511	289	0.442	-	-	651	0.226	-	-	-	-	-	-
314	X80692 CDS	-	M64301 CDS	6	1629	0.043	510	0.538	495	0.432	-	-	-	-	-	-	-	-	-	-
315	X17254 CDS	X15763 CDS	D13518 CDS	2	1239	0.075	355	0.539	336	0.427	-	-	-	-	1239	0.031	388	0.182	383	0.151
316	X87344 CDS	U35323 CDS	Z49761 CDS	10	780	0.141	198	0.624	190	0.471	-	-	233	0.427	780	0.062	231	0.244	229	0.209
317	X87344 CDS	L11145 CDS	-	11	828	0.068	244	0.598	237	0.529	-	-	-	-	-	-	-	-	-	-
318	X72990 CDS	X79233 CDS	-	13	1965	0.010	642	0.248	638	0.239	-	-	164	0.051	-	-	-	-	-	-
319	Y10260 CDS	Y10263 CDS	-	0	1659	0.024	527	0.431	518	0.401	-	-	-	-	-	-	-	-	-	-
320	Y10261 CDS	U71208 CDS	-	3	1596	0.064	472	0.682	455	0.567	-	-	-	-	-	-	-	-	-	-
321	X51521 CDS	X60671 CDS	-	14	1758	0.018	564	0.595	561	0.580	-	-	-	-	-	-	-	-	-	-
322	X82494 CDS	X75285 CDS	-	5	3510	0.104	969	0.585	934	0.442	-	-	460	0.494	-	-	-	-	-	-
323	X02415 CDS	-	X05860 CDS	8	1308	0.101	354	0.629	338	0.524	-	-	-	-	-	-	-	-	-	-
324	X06292 CDS	X12616 CDS	-	2	2460	0.056	738	0.469	717	0.408	-	-	171	0.499	-	-	-	-	-	-
325	X56597 CDS	Z22593 CDS	-	13	957	0.015	309	0.647	303	0.592	-	-	-	-	-	-	-	-	-	-
326	Z36531 CDS	M16238 CDS	-	3	1296	0.126	338	0.743	327	0.564	-	-	-	-	-	-	-	-	-	-
327	Y00796 CDS	M60778 CDS	-	1	3480	0.185	839	0.623	778	0.408	-	-	-	-	-	-	-	-	-	-
328	X51602 CDS	L07297 CDS	D28498 CDS	7	3996	0.108	1091	0.610	1024	0.462	232	0.448	457	0.426	3996	0.038	1238	0.187	1226	0.164
329	X69878 CDS	L07296 CDS	-	1	3894	0.065	1145	0.508	1105	0.431	-	-	-	-	-	-	-	-	-	-
330	U39967 CDS	U87147 CDS	-	2	1596	0.121	423	0.497	398	0.411	-	-	-	-	-	-	-	-	-	-
331	X06256 CDS	X79003 CDS	-	5	3147	0.051	948	0.434	920	0.361	-	-	159	0.281	-	-	-	-	-	-
332	X07979 CDS	Y00769 CDS	U12309 CDS	10	2394	0.042	736	0.486	719	0.434	-	-	447	0.340	2394	0.009	784	0.147	782	0.145
333	X16707 CDS	U34245 CDS	M19651 CDS	1	807	0.059	242	0.656	236	0.562	-	-	-	-	807	0.031	252	0.145	249	0.104
334	X16706 CDS	X83971 CDS	U18913 CDS	7	975	0.030	308	0.392	305	0.348	-	-	-	-	975	0.012	318	0.203	318	0.192
335	Y10812 CDS	D42083 CDS	-	3	1017	0.062	308	0.602	302	0.510	-	-	-	-	-	-	-	-	-	-
336	X17094 CDS	L26489 CDS	X55660 CDS	3	2379	0.034	744	0.419	727	0.376	243	0.329	1525	0.220	2379	0.016	768	0.185	765	0.170
337	Z69587 CDS	Y09883 CDS	-	0	1095	0.147	284	0.827	268	0.589	-	-	-	-	-	-	-	-	-	-
338	Y00839 CDS	U49351 CDS	-	3	2856	0.124	757	0.623	716	0.470	-	-	-	-	-	-	-	-	-	-
339	X14766 CDS	X61430 CDS	L08490 CDS	2	1365	0.008	447	0.402	446	0.397	215	0.245	155	0.127	1365	0.000	455	0.147	455	0.147
340	X14767 CDS	U14418 CDS	X15466 CDS	1	1422	0.010	464	0.369	458	0.344	-	-	402	0.289	1422	0.001	473	0.136	473	0.136
341	X15376 CDS	M62374 CDS	L08497 CDS	2	1398	0.008	460	0.473	457	0.436	190	0.174	-	-	1398	0.002	464	0.192	464	0.192
342	Z49878 CDS	AF010499 CDS	X08056 CDS	6	708	0.076	204	0.717	192	0.591	-	-	-	-	708	0.028	222	0.178	219	0.163
343	X54199 CDS	U01024 CDS	-	11	3030	0.081	864	0.604	829	0.514	-	-	-	-	-	-	-	-	-	-
344	X04325 CDS	M81447 CDS	X04070 CDS	2	849	0.006	279	0.325	279	0.325	-	-	593	0.292	849	0.000	283	0.112	283	0.112
345	X54673 CDS	L32178 CDS	M59742 CDS	2	1794	0.019	577	0.476	572	0.452	-	-	257	0.403	1794	0.004	594	0.115	594	0.112
346	X58072 CDS	X55123 CDS	-	6	1326	0.018	426	0.440	424	0.422	180	0.297	482	0.183	-	-	-	-	-	-
347	X04526 CDS	U29055 CDS	U34958 CDS	14	1020	0.000	340	0.473	338	0.459	-	-	-	-	1020	0.001	339	0.089	339	0.089
348	Z48475 CDS	-	X68497 CDS	2	1875	0.069	551	0.447	538	0.378	-	-	216	0.465	-	-	-	-	-	-
349	X66534 CDS	-	U60835 CDS	5	2052	0.125	558	0.735	533	0.551	450	0.841	-	-	-	-	-	-	-	-
350	X66533 CDS	-	M22562 CDS	4	1857	0.007	610	0.599	600	0.573	-	-	490	0.370	-	-	-	-	-	-
351	X03656 CDS	X05402 CDS	U37101 CDS	0	606	-	-	-	-	-	-	-	656	0.471	579	0.074	167	0.239	169	0.212
352	X55721 CDS	M58288 CDS	-	2	2493	0.249	525	0.501	485	0.314	-	-	-	-	-	-	-	-	-	-
353	X80915 CDS	U08337 CDS	-	0	1485	0.042	456	0.245	452	0.224	301	0.103	493	0.428	-	-	-	-	-	-
354	U40978 CDS	-	U80054 CDS	15	2265	0.080	655	0.459	639	0.397	-	-	-	-	-	-	-	-	-	-
355	X95520 CDS	X95521 CDS	Z22867 CDS	3	2370	0.092	664	0.355	655	0.304	-	-	-	-	2370	0.026	752	0.142	752	0.125
356	X04828 CDS	-	M12672 CDS	10	1065	0.008	350	0.321	348	0.297	-	-	499	0.198	-	-	-	-	-	-
357	X14448 CDS	U50715 CDS	-	4	1257	0.131	327	0.481	316	0.375	-	-	-	-	-	-	-	-	-	-
358	Z31713 CDS	-	X63744 CDS	3	1626	0.016	524	0.530	520	0.516	178	0.316	1935	0.374	-	-	-	-	-	-
359	X05997 CDS	-	A01157 CDS	0	1170	0.143	297	0.566	273	0.396	-	-	-	-	-	-	-	-	-	-
360	X03991 CDS	Z46845 CDS	K02813 CDS	2	540	0.056	161	0.401	160	0.379	-	-	-	-	540	0.028	169	0.211	169	0.211
361	X15722 CDS	X76341 CDS	U73174 CDS	3	1398	0.077	403	0.745	388	0.666	-	-	-	-	1248	0.034	389	0.426	383	0.378
362	X54232 CDS	-	L02896 CDS	5	1674	0.063	496	0.426	483	0.350	215	0.241	1531	0.542	-	-	-	-	-	-
363	X52008 CDS	-	X61159 CDS	0	1356	0.005	448	0.302	446	0.296	383	0.371	-	-	-	-	-	-	-	-
364	X52009 CDS	S73717 CDS	D00833 CDS	0	1347	0.009	440	0.411	436	0.395	182	0.421	-	-	1347	0.002	447	0.159	446	0.154
365	X92689 CDS	U70538 CDS	-	3	1899	0.043	580	0.526	567	0.468	-	-	-	-	-	-	-	-	-	-
366	U40367 CDS	U60987 CDS	U08027 CDS	5	2181	0.038	675	0.621	648	0.535	-	-	-	-	2181	0.024	691	0.238	689	0.232
367	Z23091 CDS	Z69595 CDS	Z69594 CDS	0	1677	0.189	393	0.498	368	0.334	-	-	-	-	1677	0.075	483	0.123	484	0.098
368	U46498 CDS	-	J03752 CDS	10	465	-	-	-	-	-	-	-	349	0.519	-	-	-	-	-	-
369	X08058 CDS	U15654 CDS	L29427 CDS	17	630	0.081	179	0.556	170	0.429	-	-	-	-	630	0.041	194	0.164	193	0.147
370	Z33622 CDS	X94616 CDS	-	3	2208	0.020	706	0.605	692	0.538	-	-	-	-	-	-	-	-	-	-
371	X82224 CDS	-	S74029 CDS	0	1266	0.107	345	0.457	329	0.344	-	-	-	-	-	-	-	-	-	-
372	X07036 CDS	Y00703 CDS	M12673 CDS	19	1182	0.002	392	0.203	392	0.195	-	-	-	-	1182	0.002	392	0.070	391	0.063
373	Y00716 CDS	M12660 CDS	-	9	3678	0.275	756	0.647	686	0.372	-	-	-	-	-	-	-	-	-	-
374	X14850 CDS	X58069 CDS	-	2	429	-	-	-	-	-	-	-	872	0.399	-	-	-	-	-	-
375	X52317 CDS	U70494 CDS	-	13	384	-	-	-	-	-	-	-	379	0.016	-	-	-	-	-	-
376	X06956 CDS	M13444 CDS	-	11	1341	0.000	447	0.323	443	0.317	-	-	-	-	-	-	-	-	-	-
377	X74142 CDS	U36760 CDS	-	1	1431	0.053	433	0.221	428	0.137	209	0.161	898	0.044	-	-	-	-	-	-
378	X17622 CDS	M96688 CDS	X17621 CDS	0	1584	0.036	490	0.545	472	0.445	851	0.224	698	0.393	1584	0.006	521	0.143	522	0.143
379	U68782 CDS	X54239 CDS	-	0	1221	0.030	383	0.383	381	0.356	-	-	-	-	-	-	-	-	-	-
380	X77366 CDS	X78709 CDS	-	5	2220	0.015	718	0.353	701	0.318	-	-	-	-	-	-	-	-	-	-
381	X15892 CDS	S62288 CDS	M29293 CDS	12	720	0.000	240	0.433	238	0.422	167	0.391	155	0.282	720	0.000	240	0.091	240	0.091
382	X16663 CDS	D42120 CDS	-	4	1431	0.077	411	0.419	404	0.340	-	-	-	-	-	-	-	-	-	-
383	X07732 CDS	AF030065 CDS	X70900 CDS	5	1248	0.056	369	0.604	355	0.512	184	0.420	277	0.287	1248	0.012	406	0.164	406	0.159
384	X90761 CDS	X75649 CDS	-	0	1206	0.113	324	0.458	310	0.349	-	-	-	-	-	-	-	-	-	-
385	X54938 CDS	-	X56917 CDS	0	1377	0.035	430	0.484	425	0.464	-	-	368	0.323	-	-	-	-	-	-
386	X89887 CDS	X92590 CDS	-	4	3045	0.025	966	0.391	949	0.349	-	-	-	-	-	-	-	-	-	-
387	X76786 CDS	D50095 CDS	D12800 CDS	1	1458	0.138	372	0.601	353	0.454	-	-	-	-	1452	0.043	441	0.148	441	0.137
388	Y08319 CDS	D12644 CDS	-	6	2034	0.013	662	0.352	650	0.315	-	-	-	-	-	-	-	-	-	-
389	X15266 CDS	-	M62826 CDS	3	1767	0.047	539	0.503	525	0.438	-	-	-	-	-	-	-	-	-	-
390	X13546 CDS	X12944 CDS	-	13	270	-	-	-	-	-	-	-	787	0.177	-	-	-	-	-	-
391	X83618 CDS	U12790 CDS	M33648 CDS	6	1296	0.052	390	0.495	379	0.435	-	-	-	-	1296	0.009	426	0.177	424	0.166
392	X76930 CDS	D29015 CDS	-	0	1395	0.022	445	0.400	438	0.375	-	-	-	-	-	-	-	-	-	-
393	U44111 CDS	-	D10693 CDS	5	876	0.089	246	0.434	237	0.327	-	-	311	0.506	-	-	-	-	-	-
394	X86681 CDS	X86682 CDS	-	0	972	0.059	291	0.382	284	0.302	-	-	-	-	-	-	-	-	-	-
395	X12671 CDS	D86729 CDS	-	18	960	0.000	320	0.348	318	0.341	-	-	678	0.103	-	-	-	-	-	-
396	X16666 CDS	X53063 CDS	-	0	891	0.067	258	0.542	246	0.473	-	-	-	-	-	-	-	-	-	-
397	X61755 CDS	U28071 CDS	-	0	666	0.002	221	0.052	219	0.037	-	-	-	-	-	-	-	-	-	-
398	X75962 CDS	X85214 CDS	X17037 CDS	1	807	0.245	172	0.884	148	0.492	-	-	184	0.762	804	0.044	244	0.124	246	0.102
399	X59372 CDS	X62669 CDS	-	1	1014	0.060	300	0.290	297	0.224	-	-	-	-	-	-	-	-	-	-
400	X59373 CDS	X62669 CDS	-	1	1020	0.013	331	0.119	329	0.102	-	-	-	-	-	-	-	-	-	-

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