Substitution rate and gene expression pattern in mammals

Genes 401 to 500

                                                                        
NbT:      number of tissues where ESTs have been detected (in human). 
LgCDS:    length of the aligned protein coding sequences (CDS).       
Ka:       non-synonymous substitution rate.                           
LgS:      number of synonymous sites.                                 
Ks:       synonymous substitution rate.                               
LgSnd:    number of synonymous sites after having removed doublet substitutions.                                                               
Ks_nd:    synonymous substitution rate without doublet substitutions. 
Lg5'UTR:  length of the aligned 5'UTRs (*).                    
K 5'UTR:  substitution rate within 5'UTRs (*).                 
Lg3'UTR:  length of the aligned 3'UTRs (*).                    
K 3'UTR:  substitution rate within 3'UTRs (*).                 
                                                                             
   (*) UTR data from Makalowski and Boguski (1998) Proc. Natl. Acad. Sci. USA 95:9407-9412                                        
   (**) When both rat and mouse orthologs are available, human/rodent substitution rates are calculated using mouse.

					Human / Rodent (**)										Mouse / Rat
	Human acc. num.	Mouse acc. num.	Rat acc. num.	NbT	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd	Lg5'UTR	K 5'UTR	Lg3'UTR	K 3'UTR	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd
401	X17360 CDS	U77364 CDS	-	1	747	0.029	236	0.337	234	0.303	249	0.040	294	0.164	-	-	-	-	-	-
402	Y09980 CDS	U56401 CDS	-	1	1248	0.020	399	0.345	393	0.316	-	-	-	-	-	-	-	-	-	-
403	X99383 CDS	-	U43534 CDS	3	2103	0.027	665	0.537	646	0.482	-	-	-	-	-	-	-	-	-	-
404	X92814 CDS	-	X76453 CDS	8	480	-	-	-	-	-	-	-	152	0.481	-	-	-	-	-	-
405	X99350 CDS	L13204 CDS	-	0	1254	0.074	361	0.552	355	0.434	-	-	-	-	-	-	-	-	-	-
406	X58288 CDS	X58287 CDS	-	6	4356	0.013	1416	0.577	1399	0.553	-	-	-	-	-	-	-	-	-	-
407	Y00371 CDS	U73744 CDS	Y00054 CDS	17	1938	0.002	644	0.546	631	0.501	-	-	-	-	1938	0.001	645	0.151	643	0.148
408	X63454 CDS	X51552 CDS	-	0	594	0.039	185	0.396	183	0.372	-	-	-	-	-	-	-	-	-	-
409	X05290 CDS	M69200 CDS	M10244 CDS	1	1491	0.066	437	0.674	419	0.591	-	-	286	0.649	1491	0.014	484	0.156	482	0.150
410	X53390 CDS	X60831 CDS	-	8	2292	0.010	747	0.403	741	0.389	-	-	647	0.229	-	-	-	-	-	-
411	X74801 CDS	Z31556 CDS	-	14	1632	0.016	527	0.497	519	0.464	-	-	-	-	-	-	-	-	-	-
412	X74837 CDS	U04299 CDS	-	3	1875	0.066	555	0.470	537	0.388	-	-	423	0.184	-	-	-	-	-	-
413	X55715 CDS	X76772 CDS	X51536 CDS	17	729	0.006	240	0.436	236	0.407	-	-	-	-	729	0.000	243	0.149	243	0.149
414	Z29481 CDS	-	D44494 CDS	3	858	0.079	250	0.390	244	0.351	-	-	294	0.650	-	-	-	-	-	-
415	X58298 CDS	X51975 CDS	-	0	1365	0.337	248	0.715	225	0.372	-	-	1108	0.590	-	-	-	-	-	-
416	X68830 CDS	M25389 CDS	-	2	267	-	-	-	-	-	-	-	497	0.518	-	-	-	-	-	-
417	X67055 CDS	X70393 CDS	X83231 CDS	3	2640	0.091	747	0.483	725	0.396	-	-	-	-	2634	0.033	819	0.195	820	0.174
418	Y08569 CDS	U57345 CDS	Z50735 CDS	4	2997	0.188	709	0.661	662	0.429	-	-	-	-	2997	0.037	926	0.158	921	0.142
419	X15606 CDS	X65490 CDS	-	9	816	0.264	166	0.638	147	0.341	-	-	173	0.384	-	-	-	-	-	-
420	X69433 CDS	U51167 CDS	-	16	1353	0.046	410	0.455	402	0.398	-	-	-	-	-	-	-	-	-	-
421	X17668 CDS	M69109 CDS	-	0	1209	0.279	249	0.653	225	0.350	-	-	-	-	-	-	-	-	-	-
422	V00534 CDS	X14455 CDS	-	0	546	-	-	-	-	-	-	-	199	0.415	-	-	-	-	-	-
423	X60459 CDS	M89641 CDS	-	3	1638	0.364	275	0.937	244	0.443	-	-	-	-	-	-	-	-	-	-
424	X03562 CDS	U71085 CDS	M29880 CDS	4	540	-	-	-	-	-	-	-	-	-	540	0.015	174	0.037	174	0.031
425	X04434 CDS	-	L29232 CDS	2	4095	0.022	1311	0.450	1286	0.414	-	-	489	0.344	-	-	-	-	-	-
426	L41607 CDS	U68182 CDS	-	1	1200	0.075	342	0.612	330	0.536	-	-	-	-	-	-	-	-	-	-
427	U03187 CDS	U23922 CDS	-	1	1968	0.339	358	0.835	306	0.450	-	-	-	-	-	-	-	-	-	-
428	X03833 CDS	X01450 CDS	D00403 CDS	0	795	0.246	164	0.538	149	0.359	-	-	1076	0.439	798	0.092	221	0.200	223	0.176
429	X59770 CDS	X59769 CDS	Z22812 CDS	4	1188	0.282	245	0.751	216	0.448	-	-	-	-	1185	0.051	358	0.159	366	0.141
430	X64532 CDS	L32838 CDS	M63101 CDS	4	531	-	-	-	-	-	-	-	-	-	531	0.059	158	0.092	157	0.072
431	X52425 CDS	M29854 CDS	X69903 CDS	2	2415	0.357	430	0.797	375	0.396	175	0.803	872	0.739	2382	0.118	634	0.186	624	0.122
432	Z68747 CDS	Z46966 CDS	-	11	1152	0.218	256	0.522	247	0.368	-	-	-	-	-	-	-	-	-	-
433	X17033 CDS	Z29987 CDS	-	0	3534	0.104	972	0.525	930	0.428	-	-	-	-	-	-	-	-	-	-
434	U19247 CDS	J05265 CDS	-	8	1380	0.363	240	0.745	210	0.348	-	-	-	-	-	-	-	-	-	-
435	X89399 CDS	U20238 CDS	-	2	2463	0.117	682	0.752	656	0.580	-	-	-	-	-	-	-	-	-	-
436	X03072 CDS	K02593 CDS	-	0	1110	0.006	366	0.352	365	0.351	-	-	-	-	-	-	-	-	-	-
437	X14445 CDS	Y00848 CDS	-	0	717	0.115	197	0.623	186	0.474	-	-	-	-	-	-	-	-	-	-
438	X53586 CDS	X69902 CDS	-	7	3219	0.037	993	0.568	961	0.495	193	0.443	343	0.202	-	-	-	-	-	-
439	X53587 CDS	-	U60096 CDS	11	5253	0.067	1540	0.470	1506	0.402	-	-	-	-	-	-	-	-	-	-
440	Z11559 CDS	X61147 CDS	L23874 CDS	8	2667	0.037	829	0.560	812	0.507	-	-	642	0.472	2667	0.017	856	0.249	853	0.239
441	X15949 CDS	J03168 CDS	-	6	1047	0.041	322	0.400	317	0.367	-	-	-	-	-	-	-	-	-	-
442	Z56281 CDS	U75839 CDS	-	9	1254	0.181	303	0.652	280	0.472	-	-	-	-	-	-	-	-	-	-
443	U52682 CDS	U20949 CDS	-	0	1347	0.041	414	0.448	403	0.381	-	-	-	-	-	-	-	-	-	-
444	U67674 CDS	AB002693 CDS	U07183 CDS	0	1044	0.119	281	0.685	272	0.532	-	-	-	-	1044	0.030	328	0.144	323	0.129
445	X07173 CDS	X70392 CDS	-	6	2838	0.105	786	0.633	760	0.519	-	-	-	-	-	-	-	-	-	-
446	X57206 CDS	-	X74227 CDS	0	1398	0.069	415	0.518	404	0.426	-	-	-	-	-	-	-	-	-	-
447	X51346 CDS	J04509 CDS	-	4	864	0.071	250	0.795	240	0.577	-	-	-	-	-	-	-	-	-	-
448	U67274 CDS	D14883 CDS	-	4	798	0.160	203	0.656	195	0.470	-	-	-	-	-	-	-	-	-	-
449	U55054 CDS	-	U55815 CDS	7	3255	0.020	1047	0.441	1026	0.399	-	-	-	-	-	-	-	-	-	-
450	X07696 CDS	D16313 CDS	-	6	1347	0.060	402	0.424	388	0.346	-	-	-	-	-	-	-	-	-	-
451	X65873 CDS	U86090 CDS	-	10	2889	0.020	929	0.340	923	0.322	-	-	-	-	-	-	-	-	-	-
452	X78678 CDS	Y09335 CDS	M86235 CDS	3	894	0.136	239	0.470	223	0.322	-	-	-	-	894	0.021	285	0.137	280	0.115
453	X97335 CDS	U95146 CDS	-	9	2559	0.188	609	0.547	587	0.346	-	-	-	-	-	-	-	-	-	-
454	X89105 CDS	U02486 CDS	-	1	648	0.095	181	0.527	169	0.353	-	-	-	-	-	-	-	-	-	-
455	X53777 CDS	-	X60212 CDS	17	552	0.002	183	0.525	183	0.525	-	-	-	-	-	-	-	-	-	-
456	X52138 CDS	M14689 CDS	X15013 CDS	18	798	0.002	265	0.567	259	0.535	-	-	-	-	798	0.002	265	0.169	263	0.162
457	Z69710 CDS	D00622 CDS	Z11994 CDS	12	1071	0.168	267	0.580	253	0.409	-	-	339	0.806	1065	0.021	344	0.145	344	0.133
458	X05153 CDS	M87863 CDS	-	0	426	-	-	-	-	-	-	-	265	0.385	-	-	-	-	-	-
459	X51985 CDS	X98113 CDS	-	2	1551	0.195	362	0.391	345	0.242	-	-	-	-	-	-	-	-	-	-
460	U21281 CDS	S81393 CDS	-	11	1038	0.106	284	0.398	271	0.291	-	-	-	-	-	-	-	-	-	-
461	Z68155 CDS	U43541 CDS	X16563 CDS	12	5388	0.065	1586	0.461	1537	0.389	-	-	-	-	5388	0.019	1727	0.207	1718	0.195
462	U17760 CDS	U43298 CDS	-	5	3504	0.106	953	0.594	915	0.487	-	-	-	-	-	-	-	-	-	-
463	X03445 CDS	D49733 CDS	-	13	1716	0.011	558	0.458	551	0.443	-	-	-	-	-	-	-	-	-	-
464	U31201 CDS	U43327 CDS	-	3	3567	0.104	980	0.454	941	0.338	-	-	-	-	-	-	-	-	-	-
465	X15525 CDS	X57199 CDS	M27893 CDS	2	1263	0.067	374	0.326	369	0.286	-	-	692	0.390	1263	0.019	406	0.109	405	0.101
466	X76180 CDS	-	U54700 CDS	2	2007	0.092	558	0.578	534	0.444	-	-	-	-	-	-	-	-	-	-
467	X98657 CDS	X99347 CDS	L32132 CDS	2	1443	0.214	322	0.567	295	0.384	-	-	-	-	1443	0.072	415	0.157	411	0.132
468	X04981 CDS	J05154 CDS	X54096 CDS	7	1314	0.085	376	0.437	367	0.360	-	-	-	-	1314	0.041	402	0.228	400	0.201
469	X14055 CDS	M12056 CDS	-	4	1527	0.016	493	0.504	483	0.479	-	-	441	0.447	-	-	-	-	-	-
470	X03077 CDS	Y00309 CDS	X01964 CDS	10	996	0.032	312	0.644	295	0.568	-	-	492	0.359	996	0.015	321	0.254	315	0.226
471	X13794 CDS	X51905 CDS	U07181 CDS	18	1002	0.010	327	0.771	315	0.673	-	-	225	0.282	1002	0.003	332	0.273	330	0.260
472	X13916 CDS	X67469 CDS	-	8	13632	0.012	4432	0.494	4378	0.469	455	0.154	755	0.220	-	-	-	-	-	-
473	U21931 CDS	-	M57284 CDS	5	999	0.146	255	0.650	248	0.508	-	-	-	-	-	-	-	-	-	-
474	X61615 CDS	D26177 CDS	D86345 CDS	4	3276	0.149	824	0.688	766	0.471	-	-	-	-	3276	0.052	985	0.314	967	0.270
475	X17405 CDS	-	M22340 CDS	1	1062	0.024	338	0.468	332	0.430	-	-	-	-	-	-	-	-	-	-
476	U04285 CDS	-	S81497 CDS	4	1185	0.140	298	0.635	277	0.450	-	-	-	-	-	-	-	-	-	-
477	X05908 CDS	M69260 CDS	Y00446 CDS	8	1038	0.064	302	0.475	296	0.401	-	-	277	0.409	1038	0.032	324	0.155	322	0.138
478	U72342 CDS	U95120 CDS	-	8	1230	0.001	409	0.205	409	0.205	218	0.160	153	0.052	-	-	-	-	-	-
479	X17206 CDS	M20632 CDS	-	17	663	0.002	220	0.517	220	0.517	294	0.213	-	-	-	-	-	-	-	-
480	U66796 CDS	U12147 CDS	-	8	9318	0.071	2721	0.530	2637	0.447	-	-	-	-	-	-	-	-	-	-
481	X14390 CDS	M60847 CDS	L03294 CDS	3	1422	0.040	439	0.480	436	0.425	-	-	-	-	1422	0.014	459	0.167	457	0.160
482	X79882 CDS	-	U09870 CDS	10	2655	0.072	785	0.546	757	0.437	-	-	-	-	-	-	-	-	-	-
483	X97249 CDS	-	X90355 CDS	1	2232	0.161	545	0.462	521	0.332	-	-	-	-	-	-	-	-	-	-
484	U27293 CDS	M63848 CDS	S87522 CDS	13	1833	0.039	566	0.516	545	0.453	-	-	-	-	1812	0.012	588	0.259	586	0.247
485	X16150 CDS	M36058 CDS	S79523 CDS	3	1116	0.152	281	0.573	263	0.380	-	-	333	0.476	1116	0.096	310	0.357	294	0.235
486	X64364 CDS	D82019 CDS	X67215 CDS	14	807	0.301	157	0.854	141	0.558	-	-	441	0.614	804	0.079	230	0.223	228	0.170
487	X76220 CDS	Y07627 CDS	-	2	459	-	-	-	-	-	-	-	500	0.498	-	-	-	-	-	-
488	U60899 CDS	U87240 CDS	-	6	2967	0.156	758	0.706	697	0.499	-	-	-	-	-	-	-	-	-	-
489	X86693 CDS	U66166 CDS	U27562 CDS	12	1917	0.228	428	0.701	397	0.431	-	-	-	-	1890	0.060	557	0.255	556	0.220
490	X66867 CDS	M63903 CDS	D14447 CDS	3	309	-	-	-	-	-	-	-	-	-	480	0.008	157	0.034	157	0.034
491	X15954 CDS	S42292 CDS	M14105 CDS	1	711	-	-	-	-	-	-	-	-	-	708	0.058	212	0.177	214	0.175
492	X96753 CDS	-	X56541 CDS	3	6951	0.113	1889	0.533	1792	0.414	-	-	-	-	-	-	-	-	-	-
493	Z25821 CDS	Z14050 CDS	-	5	867	0.173	210	0.759	192	0.482	-	-	-	-	-	-	-	-	-	-
494	X62654 CDS	D16432 CDS	X61654 CDS	15	714	0.118	189	0.552	175	0.379	-	-	-	-	714	0.019	230	0.158	228	0.150
495	Y00477 CDS	U04962 CDS	-	1	792	0.199	190	1.005	173	0.645	-	-	-	-	-	-	-	-	-	-
496	U49020 CDS	U30823 CDS	-	3	1494	0.033	466	0.376	462	0.338	-	-	-	-	-	-	-	-	-	-
497	U67368 CDS	U72141 CDS	-	9	2154	0.025	684	0.534	663	0.469	-	-	-	-	-	-	-	-	-	-
498	Y08223 CDS	Y08222 CDS	-	1	1482	0.047	449	0.420	437	0.349	-	-	-	-	-	-	-	-	-	-
499	X94552 CDS	-	D16817 CDS	0	2745	0.003	909	0.414	904	0.404	-	-	-	-	-	-	-	-	-	-
500	U89335 CDS	U43691 CDS	-	1	5883	0.109	1607	0.487	1542	0.372	-	-	-	-	-	-	-	-	-	-

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