Substitution rate and gene expression pattern in mammals

Genes 501 to 600

                                                                        
NbT:      number of tissues where ESTs have been detected (in human). 
LgCDS:    length of the aligned protein coding sequences (CDS).       
Ka:       non-synonymous substitution rate.                           
LgS:      number of synonymous sites.                                 
Ks:       synonymous substitution rate.                               
LgSnd:    number of synonymous sites after having removed doublet substitutions.                                                               
Ks_nd:    synonymous substitution rate without doublet substitutions. 
Lg5'UTR:  length of the aligned 5'UTRs (*).                    
K 5'UTR:  substitution rate within 5'UTRs (*).                 
Lg3'UTR:  length of the aligned 3'UTRs (*).                    
K 3'UTR:  substitution rate within 3'UTRs (*).                 
                                                                             
   (*) UTR data from Makalowski and Boguski (1998) Proc. Natl. Acad. Sci. USA 95:9407-9412                                        
   (**) When both rat and mouse orthologs are available, human/rodent substitution rates are calculated using mouse.

					Human / Rodent (**)										Mouse / Rat
	Human acc. num.	Mouse acc. num.	Rat acc. num.	NbT	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd	Lg5'UTR	K 5'UTR	Lg3'UTR	K 3'UTR	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd
501	X66401 CDS	U35323 CDS	D10757 CDS	6	657	0.068	194	0.541	190	0.487	-	-	-	-	657	0.025	208	0.167	208	0.162
502	X66922 CDS	-	U84038 CDS	5	831	0.004	276	0.020	276	0.020	-	-	-	-	-	-	-	-	-	-
503	Z29678 CDS	Z23066 CDS	-	3	1257	0.032	394	0.504	381	0.442	164	0.260	401	0.183	-	-	-	-	-	-
504	X05450 CDS	K02241 CDS	M12021 CDS	4	564	0.031	176	0.639	173	0.576	-	-	-	-	564	0.005	186	0.153	186	0.148
505	X58851 CDS	M20772 CDS	X51531 CDS	6	579	0.049	176	0.483	172	0.387	-	-	-	-	579	0.024	184	0.149	184	0.133
506	X82456 CDS	X96973 CDS	-	5	783	0.025	250	0.391	250	0.369	-	-	-	-	-	-	-	-	-	-
507	X80200 CDS	X92346 CDS	-	7	1410	0.029	444	0.476	429	0.415	-	-	-	-	-	-	-	-	-	-
508	X80198 CDS	X82457 CDS	-	8	1335	0.034	415	0.433	408	0.379	-	-	-	-	-	-	-	-	-	-
509	X70326 CDS	S65597 CDS	-	10	585	0.022	187	0.238	188	0.224	-	-	706	0.085	-	-	-	-	-	-
510	Z48481 CDS	U54984 CDS	X83537 CDS	0	1746	0.020	560	0.444	554	0.415	-	-	528	0.310	1746	0.010	570	0.160	569	0.154
511	X14322 CDS	L35528 CDS	X56600 CDS	5	666	0.064	199	0.526	193	0.407	-	-	330	0.412	666	0.027	210	0.142	209	0.134
512	Z48051 CDS	L29503 CDS	M99485 CDS	1	738	0.080	212	0.503	205	0.451	-	-	-	-	735	0.033	229	0.219	228	0.208
513	U10492 CDS	Z15103 CDS	-	0	756	0.108	206	0.458	196	0.311	-	-	1083	0.417	-	-	-	-	-	-
514	X82629 CDS	Z16406 CDS	Z17223 CDS	0	909	0.009	297	0.493	294	0.477	192	0.359	1082	0.266	909	0.004	300	0.134	300	0.134
515	Z21966 CDS	L13763 CDS	-	1	903	0.026	287	0.540	279	0.483	215	0.299	-	-	-	-	-	-	-	-
516	X61970 CDS	AF019661 CDS	D10756 CDS	13	723	0.011	236	0.289	236	0.280	-	-	157	0.239	723	0.007	238	0.136	238	0.128
517	X56740 CDS	-	M75153 CDS	15	648	0.000	216	0.215	214	0.200	-	-	-	-	-	-	-	-	-	-
518	X56741 CDS	S53270 CDS	-	4	618	0.034	193	0.331	192	0.283	-	-	-	-	-	-	-	-	-	-
519	X14618 CDS	M99054 CDS	M76110 CDS	4	975	0.096	277	0.680	255	0.511	-	-	275	0.474	975	0.030	306	0.255	303	0.216
520	X64878 CDS	D86599 CDS	U15280 CDS	0	1164	0.048	355	0.502	347	0.438	-	-	-	-	1164	0.015	377	0.185	376	0.172
521	X65634 CDS	X65635 CDS	-	2	945	0.158	237	0.565	219	0.334	-	-	-	-	-	-	-	-	-	-
522	X78710 CDS	X71327 CDS	-	3	2022	0.038	622	0.259	608	0.217	-	-	214	0.256	-	-	-	-	-	-
523	X83013 CDS	L47970 CDS	-	1	2679	0.079	764	0.520	716	0.390	-	-	-	-	-	-	-	-	-	-
524	X69086 CDS	Y12229 CDS	-	4	10284	0.073	2989	0.576	2886	0.493	-	-	-	-	-	-	-	-	-	-
525	U32515 CDS	L38822 CDS	AF003008 CDS	3	684	0.025	218	0.348	218	0.342	-	-	-	-	678	0.020	217	0.136	219	0.124
526	X00364 CDS	L00039 CDS	-	6	1314	0.045	401	0.485	396	0.442	-	-	-	-	-	-	-	-	-	-
527	X17651 CDS	X15784 CDS	-	1	738	0.070	216	0.280	216	0.243	-	-	592	0.223	-	-	-	-	-	-
528	X62155 CDS	M95800 CDS	-	1	669	0.026	212	0.320	211	0.308	-	-	661	0.236	-	-	-	-	-	-
529	X14894 CDS	X56182 CDS	-	1	765	0.057	227	0.474	219	0.419	-	-	586	0.322	-	-	-	-	-	-
530	X52011 CDS	X59060 CDS	M84685 CDS	2	726	0.022	231	0.331	231	0.318	-	-	-	-	726	0.004	240	0.134	240	0.134
531	X13988 CDS	-	X04267 CDS	6	5820	0.009	1905	0.474	1877	0.451	-	-	-	-	-	-	-	-	-	-
532	X66141 CDS	M91602 CDS	M30304 CDS	3	498	0.038	157	0.857	152	0.684	-	-	-	-	498	0.018	161	0.274	160	0.239
533	X56677 CDS	X61655 CDS	M84176 CDS	0	954	0.067	280	0.502	271	0.402	-	-	588	0.414	954	0.035	298	0.105	297	0.090
534	X98507 CDS	X99638 CDS	X74800 CDS	7	2421	0.021	773	0.493	753	0.440	-	-	-	-	2421	0.009	791	0.176	790	0.169
535	Z82248 CDS	D87661 CDS	D17445 CDS	8	738	0.006	242	0.307	242	0.308	-	-	758	0.174	738	0.003	244	0.075	244	0.075
536	U46901 CDS	-	S73007 CDS	5	411	-	-	-	-	-	-	-	176	0.487	-	-	-	-	-	-
537	Z50101 CDS	Z49204 CDS	-	6	3258	0.038	1006	0.554	971	0.481	-	-	-	-	-	-	-	-	-	-
538	U08438 CDS	-	M87854 CDS	2	2058	0.027	660	0.449	654	0.408	-	-	427	0.275	-	-	-	-	-	-
539	X54315 CDS	M31131 CDS	AF097593 CDS	4	2718	0.021	869	0.574	860	0.546	377	0.167	941	0.089	2718	0.008	891	0.194	888	0.185
540	X16841 CDS	Y00051 CDS	-	4	2175	0.042	671	0.460	662	0.403	158	0.208	236	0.559	-	-	-	-	-	-
541	X51408 CDS	-	X67250 CDS	5	897	0.016	290	0.445	289	0.419	-	-	-	-	-	-	-	-	-	-
542	X85030 CDS	X92523 CDS	-	3	2463	0.032	768	0.367	762	0.351	-	-	-	-	-	-	-	-	-	-
543	Y10552 CDS	Y10656 CDS	-	3	1902	0.040	585	0.452	576	0.410	-	-	-	-	-	-	-	-	-	-
544	Z36715 CDS	Z32815 CDS	-	2	1221	0.048	371	0.351	364	0.290	298	0.055	-	-	-	-	-	-	-	-
545	X05608 CDS	M13016 CDS	-	5	1623	0.029	510	0.544	497	0.466	-	-	-	-	-	-	-	-	-	-
546	Y00067 CDS	X05640 CDS	-	4	2529	0.052	765	0.473	753	0.402	-	-	-	-	-	-	-	-	-	-
547	X59711 CDS	-	M34238 CDS	1	1023	0.003	340	0.447	337	0.411	164	0.163	155	0.462	-	-	-	-	-	-
548	X99133 CDS	X81627 CDS	X13295 CDS	4	594	-	-	-	-	-	-	-	-	-	591	0.106	158	0.189	157	0.164
549	Y10313 CDS	X17400 CDS	-	9	1347	0.071	401	0.429	387	0.321	-	-	-	-	-	-	-	-	-	-
550	X82245 CDS	X14480 CDS	-	5	3729	0.087	1053	0.544	1021	0.448	-	-	-	-	-	-	-	-	-	-
551	AF005896 CDS	U59761 CDS	D84450 CDS	12	834	0.184	204	0.463	198	0.301	-	-	-	-	831	0.085	233	0.166	232	0.134
552	X16396 CDS	J04627 CDS	-	2	1032	0.041	318	0.587	317	0.538	-	-	915	0.387	-	-	-	-	-	-
553	Y00664 CDS	X03919 CDS	-	3	1359	0.083	388	0.592	375	0.511	-	-	-	-	-	-	-	-	-	-
554	Z11933 CDS	M88300 CDS	-	0	1329	0.004	440	0.285	441	0.273	201	0.122	499	0.216	-	-	-	-	-	-
555	X75918 CDS	U86783 CDS	-	3	1794	0.004	595	0.273	592	0.270	309	0.276	-	-	-	-	-	-	-	-
556	X92396 CDS	X96737 CDS	-	2	660	0.014	214	0.298	210	0.282	-	-	-	-	-	-	-	-	-	-
557	X78351 CDS	X97863 CDS	-	1	1053	0.106	287	0.512	274	0.384	-	-	-	-	-	-	-	-	-	-
558	X87832 CDS	D86948 CDS	-	2	2280	0.021	731	0.560	718	0.529	-	-	-	-	-	-	-	-	-	-
559	X58521 CDS	S59342 CDS	-	4	1551	0.128	411	0.803	384	0.633	-	-	-	-	-	-	-	-	-	-
560	U50146 CDS	D86238 CDS	-	0	1140	0.031	359	0.493	346	0.427	-	-	-	-	-	-	-	-	-	-
561	U31342 CDS	M96823 CDS	-	5	1359	0.068	395	0.556	378	0.435	-	-	217	0.578	-	-	-	-	-	-
562	Y08612 CDS	-	U93692 CDS	13	2220	0.061	654	0.529	635	0.450	-	-	-	-	-	-	-	-	-	-
563	Z48804 CDS	X98352 CDS	-	1	1206	0.126	316	0.601	299	0.458	-	-	-	-	-	-	-	-	-	-
564	X69398 CDS	Z25524 CDS	D87659 CDS	5	909	0.206	213	0.589	196	0.376	-	-	192	0.315	906	0.038	278	0.170	275	0.150
565	X74614 CDS	X79446 CDS	-	1	705	0.029	224	0.793	220	0.760	-	-	-	-	-	-	-	-	-	-
566	U58010 CDS	D32137 CDS	-	5	2031	0.326	406	0.655	375	0.319	-	-	-	-	-	-	-	-	-	-
567	X51801 CDS	X56906 CDS	-	2	1290	0.016	418	0.399	418	0.381	-	-	465	0.485	-	-	-	-	-	-
568	X06985 CDS	X13356 CDS	J02722 CDS	5	864	0.103	236	0.580	227	0.483	-	-	589	0.442	864	0.037	269	0.188	268	0.158
569	X74794 CDS	D26089 CDS	-	10	2586	0.028	818	0.513	804	0.480	-	-	-	-	-	-	-	-	-	-
570	X74795 CDS	D26090 CDS	-	8	2199	0.033	688	0.525	672	0.462	-	-	-	-	-	-	-	-	-	-
571	Y07684 CDS	-	X87763 CDS	3	1164	0.070	339	0.497	334	0.429	-	-	-	-	-	-	-	-	-	-
572	Y09561 CDS	-	X95882 CDS	0	1785	0.117	477	0.554	456	0.432	-	-	-	-	-	-	-	-	-	-
573	X83688 CDS	X84896 CDS	X80477 CDS	0	1197	0.056	357	0.487	349	0.415	169	0.594	423	0.396	1197	0.013	389	0.125	389	0.125
574	X97058 CDS	-	D63665 CDS	1	984	0.071	287	0.534	277	0.471	222	0.588	306	0.848	-	-	-	-	-	-
575	X80343 CDS	Y11335 CDS	U50707 CDS	3	921	0.008	302	0.364	302	0.364	-	-	-	-	921	0.000	307	0.111	307	0.111
576	X77094 CDS	U59488 CDS	-	4	1017	0.077	293	0.569	274	0.411	-	-	-	-	-	-	-	-	-	-
577	X16699 CDS	D50834 CDS	M29853 CDS	2	1533	0.090	435	0.405	423	0.348	-	-	379	0.515	1533	0.043	469	0.154	464	0.125
578	Y00097 CDS	X13460 CDS	X86086 CDS	11	2019	0.030	635	0.414	624	0.395	-	-	345	0.635	2019	0.009	660	0.148	660	0.145
579	X52104 CDS	X65627 CDS	-	17	1842	0.009	603	0.257	602	0.245	208	0.355	357	0.026	-	-	-	-	-	-
580	U68104 CDS	X65553 CDS	-	18	1908	0.002	633	0.208	633	0.206	-	-	-	-	-	-	-	-	-	-
581	X60435 CDS	AB010149 CDS	X80290 CDS	0	525	-	-	-	-	-	-	-	1367	0.178	525	0.039	164	0.198	163	0.175
582	X67951 CDS	D21252 CDS	D30035 CDS	18	597	0.028	190	0.328	185	0.302	-	-	269	0.439	597	0.014	193	0.113	191	0.100
583	Z49993 CDS	Z48043 CDS	U61373 CDS	1	1191	0.101	331	0.590	318	0.498	-	-	-	-	1188	0.034	369	0.273	368	0.265
584	X69438 CDS	-	M65008 CDS	1	1431	0.078	412	0.453	397	0.338	-	-	505	0.299	-	-	-	-	-	-
585	U45255 CDS	X55781 CDS	-	0	1245	0.011	406	0.188	404	0.175	-	-	-	-	-	-	-	-	-	-
586	X64810 CDS	M58589 CDS	M76705 CDS	1	2259	0.040	696	0.422	682	0.368	211	0.334	167	0.347	2256	0.025	716	0.150	713	0.140
587	X63629 CDS	X06340 CDS	-	2	2457	0.098	678	0.613	651	0.502	-	-	638	0.546	-	-	-	-	-	-
588	X67318 CDS	-	M23990 CDS	2	1257	0.089	350	0.592	329	0.405	-	-	-	-	-	-	-	-	-	-
589	X73424 CDS	-	M14634 CDS	9	1617	0.047	493	0.492	482	0.416	-	-	-	-	-	-	-	-	-	-
590	V00571 CDS	-	M54987 CDS	2	561	0.118	152	0.498	145	0.366	-	-	-	-	-	-	-	-	-	-
591	U40370 CDS	U56649 CDS	-	2	1605	0.045	491	0.492	478	0.422	-	-	-	-	-	-	-	-	-	-
592	X03795 CDS	S66873 CDS	-	2	633	0.041	194	0.395	190	0.375	-	-	-	-	-	-	-	-	-	-
593	Y10196 CDS	U73910 CDS	-	0	2247	0.022	719	0.354	702	0.310	-	-	-	-	-	-	-	-	-	-
594	X15573 CDS	J03928 CDS	X58865 CDS	8	2340	0.034	731	0.524	720	0.491	-	-	324	0.848	2340	0.004	773	0.212	769	0.204
595	X05246 CDS	M17299 CDS	-	0	1251	0.076	359	0.504	350	0.449	-	-	255	0.511	-	-	-	-	-	-
596	X04741 CDS	-	D10699 CDS	10	636	0.026	201	0.508	199	0.461	-	-	-	-	-	-	-	-	-	-
597	X04412 CDS	J04953 CDS	-	15	2193	0.029	690	0.368	681	0.335	-	-	-	-	-	-	-	-	-	-
598	X70848 CDS	-	D00859 CDS	14	990	0.000	330	0.457	326	0.446	-	-	324	0.198	-	-	-	-	-	-
599	Z37986 CDS	X97755 CDS	-	11	690	0.142	179	0.567	164	0.391	-	-	-	-	-	-	-	-	-	-
600	X80590 CDS	L08059 CDS	-	2	1161	0.035	362	0.522	354	0.488	-	-	-	-	-	-	-	-	-	-

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