Substitution rate and gene expression pattern in mammals

Genes 801 to 900

                                                                        
NbT:      number of tissues where ESTs have been detected (in human). 
LgCDS:    length of the aligned protein coding sequences (CDS).       
Ka:       non-synonymous substitution rate.                           
LgS:      number of synonymous sites.                                 
Ks:       synonymous substitution rate.                               
LgSnd:    number of synonymous sites after having removed doublet substitutions.                                                               
Ks_nd:    synonymous substitution rate without doublet substitutions. 
Lg5'UTR:  length of the aligned 5'UTRs (*).                    
K 5'UTR:  substitution rate within 5'UTRs (*).                 
Lg3'UTR:  length of the aligned 3'UTRs (*).                    
K 3'UTR:  substitution rate within 3'UTRs (*).                 
                                                                             
   (*) UTR data from Makalowski and Boguski (1998) Proc. Natl. Acad. Sci. USA 95:9407-9412                                        
   (**) When both rat and mouse orthologs are available, human/rodent substitution rates are calculated using mouse.

					Human / Rodent (**)										Mouse / Rat
	Human acc. num.	Mouse acc. num.	Rat acc. num.	NbT	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd	Lg5'UTR	K 5'UTR	Lg3'UTR	K 3'UTR	LgCDS	Ka	LgS	Ks	LgSnd	Ks_nd
801	U02619 CDS	-	L28801 CDS	4	6255	0.141	1615	0.702	1513	0.518	-	-	-	-	-	-	-	-	-	-
802	U02680 CDS	U82324 CDS	-	8	1050	0.026	332	0.441	328	0.407	-	-	-	-	-	-	-	-	-	-
803	U02687 CDS	X59398 CDS	-	1	2979	0.084	852	0.659	825	0.571	-	-	-	-	-	-	-	-	-	-
804	U03057 CDS	U90355 CDS	-	6	1479	0.024	469	0.426	465	0.399	-	-	1092	0.451	-	-	-	-	-	-
805	U03105 CDS	-	U61729 CDS	9	804	0.117	218	0.787	211	0.603	-	-	-	-	-	-	-	-	-	-
806	U03269 CDS	U16741 CDS	-	9	858	0.009	281	0.287	278	0.268	-	-	-	-	-	-	-	-	-	-
807	U03270 CDS	D16301 CDS	-	1	516	0.056	156	0.648	155	0.597	-	-	199	0.551	-	-	-	-	-	-
808	U03271 CDS	U10407 CDS	-	15	816	0.000	272	0.347	272	0.347	-	-	172	0.150	-	-	-	-	-	-
809	U03272 CDS	L39790 CDS	-	4	8709	0.023	2777	0.622	2731	0.575	-	-	-	-	-	-	-	-	-	-
810	U03493 CDS	X63100 CDS	-	2	1188	0.016	384	0.300	383	0.291	-	-	-	-	-	-	-	-	-	-
811	U03864 CDS	S80044 CDS	M60654 CDS	0	1680	0.127	452	0.634	432	0.473	-	-	-	-	1665	0.019	535	0.129	533	0.116
812	U03865 CDS	Y12738 CDS	M60655 CDS	0	1542	0.024	491	0.407	489	0.388	-	-	-	-	1542	0.010	505	0.125	505	0.116
813	U04241 CDS	L12140 CDS	-	10	591	0.003	196	0.851	194	0.821	-	-	-	-	-	-	-	-	-	-
814	U04270 CDS	-	Z96106 CDS	3	3477	0.022	1111	0.451	1086	0.392	-	-	-	-	-	-	-	-	-	-
815	U04313 CDS	U54705 CDS	U58857 CDS	3	1125	0.060	334	0.510	320	0.407	-	-	-	-	1125	0.028	352	0.169	348	0.151
816	U04636 CDS	M82866 CDS	L25925 CDS	0	1812	0.076	524	0.547	502	0.454	-	-	1365	0.445	1812	0.020	580	0.206	575	0.196
817	U04897 CDS	U53228 CDS	-	1	1569	0.011	509	0.394	501	0.359	-	-	-	-	-	-	-	-	-	-
818	U05259 CDS	M31773 CDS	-	4	660	0.223	153	0.659	142	0.455	-	-	312	0.387	-	-	-	-	-	-
819	U05340 CDS	-	U05341 CDS	9	1497	0.029	472	0.407	461	0.360	-	-	361	0.337	-	-	-	-	-	-
820	U05596 CDS	M28383 CDS	J05167 CDS	4	3681	0.023	1174	0.490	1141	0.437	-	-	190	0.278	3681	0.008	1206	0.170	1197	0.158
821	U05659 CDS	U66827 CDS	-	2	915	0.180	222	0.569	209	0.405	-	-	-	-	-	-	-	-	-	-
822	U05682 CDS	U18933 CDS	D37880 CDS	4	2640	0.058	789	0.368	777	0.318	246	0.216	996	0.266	2640	0.015	854	0.126	851	0.117
823	U06233 CDS	S68377 CDS	-	0	1230	0.021	398	0.415	392	0.377	-	-	-	-	-	-	-	-	-	-
824	U06454 CDS	-	U12149 CDS	0	1656	0.014	538	0.442	520	0.380	-	-	603	0.458	-	-	-	-	-	-
825	U06469 CDS	D43797 CDS	-	0	1569	0.062	469	0.525	449	0.433	-	-	206	0.311	-	-	-	-	-	-
826	U06631 CDS	M95564 CDS	-	8	1758	0.307	345	0.908	305	0.512	174	0.759	440	0.836	-	-	-	-	-	-
827	U06698 CDS	X61435 CDS	-	2	3078	0.025	974	0.652	941	0.560	151	0.933	154	0.121	-	-	-	-	-	-
828	U06863 CDS	M91380 CDS	U06864 CDS	3	918	0.041	281	0.407	276	0.316	-	-	934	0.341	918	0.020	293	0.158	290	0.128
829	U06935 CDS	-	S58745 CDS	0	783	0.007	257	0.381	257	0.381	-	-	-	-	-	-	-	-	-	-
830	U07132 CDS	U09419 CDS	U20389 CDS	6	1338	0.060	402	0.573	391	0.481	189	0.601	344	0.392	1338	0.007	439	0.179	438	0.178
831	U07151 CDS	-	U12568 CDS	12	546	0.014	177	0.419	177	0.405	-	-	250	0.339	-	-	-	-	-	-
832	U07158 CDS	U76832 CDS	-	10	891	0.054	266	0.488	261	0.416	-	-	-	-	-	-	-	-	-	-
833	U07225 CDS	S83099 CDS	U56839 CDS	0	1119	0.063	331	0.518	326	0.456	269	0.831	547	0.433	1116	0.024	355	0.183	352	0.165
834	U07349 CDS	U50595 CDS	-	6	2457	0.035	766	0.478	752	0.433	-	-	-	-	-	-	-	-	-	-
835	U07358 CDS	U23789 CDS	D49785 CDS	5	2565	0.026	810	0.350	796	0.318	-	-	635	0.177	2565	0.010	836	0.126	868	0.120
836	U07364 CDS	U11075 CDS	-	2	1332	0.016	434	0.433	428	0.409	-	-	469	0.243	-	-	-	-	-	-
837	U07695 CDS	Z49085 CDS	-	3	2961	0.044	910	0.538	888	0.476	-	-	636	0.386	-	-	-	-	-	-
838	U07707 CDS	L21768 CDS	-	3	2682	0.059	801	0.294	791	0.251	-	-	213	0.253	-	-	-	-	-	-
839	U07802 CDS	M58564 CDS	-	4	1089	0.054	330	0.460	327	0.396	-	-	-	-	-	-	-	-	-	-
840	U07819 CDS	X14943 CDS	D38492 CDS	3	3054	0.024	970	0.719	943	0.658	160	0.585	178	0.203	3054	0.006	1006	0.320	1001	0.310
841	U07882 CDS	L11064 CDS	D16348 CDS	0	1116	0.035	347	0.384	344	0.348	-	-	187	0.530	1116	0.015	361	0.164	359	0.156
842	U08023 CDS	U21301 CDS	-	4	2979	0.107	807	0.549	774	0.424	-	-	-	-	-	-	-	-	-	-
843	U08336 CDS	U18658 CDS	-	2	585	0.040	183	0.274	181	0.244	-	-	352	0.281	-	-	-	-	-	-
844	U08998 CDS	U79962 CDS	-	5	1095	0.042	338	0.342	330	0.290	-	-	-	-	-	-	-	-	-	-
845	U09002 CDS	D10217 CDS	M91561 CDS	3	4392	0.024	1394	0.475	1367	0.441	155	0.060	-	-	4392	0.008	1441	0.146	1437	0.143
846	U09117 CDS	-	M20637 CDS	7	2268	0.052	687	0.524	674	0.446	-	-	257	0.450	-	-	-	-	-	-
847	U09303 CDS	Z48781 CDS	U07560 CDS	2	1035	0.025	330	0.330	327	0.314	307	0.150	409	0.140	1035	0.007	340	0.131	339	0.129
848	U09648 CDS	U01170 CDS	-	1	1974	0.072	573	0.439	554	0.376	-	-	173	0.860	-	-	-	-	-	-
849	U09716 CDS	-	U44129 CDS	6	1527	0.055	454	0.569	441	0.460	-	-	176	0.555	-	-	-	-	-	-
850	U09759 CDS	-	L27112 CDS	8	1269	0.007	417	0.435	413	0.411	-	-	438	0.232	-	-	-	-	-	-
851	U09860 CDS	U73378 CDS	-	0	3057	0.160	765	0.544	733	0.392	-	-	-	-	-	-	-	-	-	-
852	U09954 CDS	U17331 CDS	X51706 CDS	18	516	0.008	169	0.449	164	0.428	-	-	-	-	516	0.005	170	0.259	170	0.259
853	U10037 CDS	AJ001692 CDS	S75952 CDS	0	1389	0.051	420	0.493	405	0.401	-	-	1527	0.465	1389	0.042	433	0.258	431	0.213
854	U10116 CDS	X84940 CDS	X94371 CDS	0	711	0.254	154	0.689	141	0.389	-	-	-	-	705	0.080	202	0.254	205	0.171
855	U10117 CDS	U10118 CDS	-	11	927	0.074	268	0.567	258	0.431	-	-	-	-	-	-	-	-	-	-
856	U10301 CDS	AB022342 CDS	X54656 CDS	1	2664	0.005	882	0.211	873	0.197	-	-	-	-	2664	0.002	884	0.074	882	0.071
857	U10302 CDS	-	M85036 CDS	1	2664	0.005	880	0.210	871	0.197	-	-	160	0.687	-	-	-	-	-	-
858	U10360 CDS	U60328 CDS	D45249 CDS	15	747	0.028	234	0.384	234	0.381	-	-	-	-	747	0.012	242	0.176	242	0.176
859	U10554 CDS	AF019045 CDS	X80395 CDS	1	1587	0.029	503	0.609	493	0.551	432	0.417	171	0.401	1587	0.003	526	0.138	525	0.133
860	U10906 CDS	U09968 CDS	D86924 CDS	4	591	0.060	173	0.405	164	0.294	-	-	-	-	591	0.017	190	0.058	190	0.053
861	U10990 CDS	U11688 CDS	-	2	1788	0.009	586	0.278	578	0.253	-	-	158	0.466	-	-	-	-	-	-
862	U11282 CDS	U45980 CDS	-	0	1026	0.120	274	0.786	261	0.597	-	-	-	-	-	-	-	-	-	-
863	U11292 CDS	U60330 CDS	-	6	762	0.020	246	0.287	243	0.254	-	-	-	-	-	-	-	-	-	-
864	U11690 CDS	U22325 CDS	-	5	2880	0.032	900	0.288	891	0.256	-	-	-	-	-	-	-	-	-	-
865	U12255 CDS	D37873 CDS	M35495 CDS	9	1089	0.232	243	1.004	210	0.608	-	-	188	0.476	1089	0.044	332	0.223	328	0.182
866	U12404 CDS	U12403 CDS	X93352 CDS	18	651	0.006	215	0.568	208	0.521	-	-	-	-	651	0.004	216	0.179	216	0.180
867	U12421 CDS	D21207 CDS	M84221 CDS	11	507	-	-	-	-	-	-	-	235	0.526	507	0.025	160	0.174	159	0.147
868	U12431 CDS	U29088 CDS	-	1	1077	0.007	356	0.199	356	0.192	-	-	-	-	-	-	-	-	-	-
869	U12535 CDS	L21671 CDS	-	5	2463	0.058	730	0.657	707	0.583	254	0.573	627	0.451	-	-	-	-	-	-
870	U12597 CDS	L35303 CDS	-	4	1503	0.102	418	0.619	402	0.488	-	-	-	-	-	-	-	-	-	-
871	U12707 CDS	U54788 CDS	-	3	1506	0.065	448	0.508	435	0.427	-	-	-	-	-	-	-	-	-	-
872	U12778 CDS	-	U64451 CDS	1	1296	0.092	361	0.569	350	0.472	-	-	-	-	-	-	-	-	-	-
873	U13044 CDS	M74515 CDS	-	3	1362	0.022	433	0.426	424	0.366	210	0.236	-	-	-	-	-	-	-	-
874	U13046 CDS	M74516 CDS	-	5	1146	0.009	374	0.369	374	0.355	-	-	1310	0.232	-	-	-	-	-	-
875	U13048 CDS	M74517 CDS	-	5	1044	0.012	339	0.291	339	0.287	-	-	-	-	-	-	-	-	-	-
876	U13052 CDS	U13053 CDS	-	6	885	0.029	278	0.429	272	0.368	-	-	-	-	-	-	-	-	-	-
877	U13173 CDS	-	D50306 CDS	0	2124	0.089	596	0.660	573	0.563	-	-	681	0.507	-	-	-	-	-	-
878	U13219 CDS	U42556 CDS	-	2	1059	0.028	333	0.437	327	0.392	-	-	-	-	-	-	-	-	-	-
879	U13261 CDS	AB003144 CDS	-	10	1434	0.027	454	0.420	448	0.391	-	-	410	0.110	-	-	-	-	-	-
880	U13666 CDS	-	S74702 CDS	1	1059	0.127	276	0.558	256	0.381	-	-	-	-	-	-	-	-	-	-
881	U13680 CDS	X04752 CDS	U07177 CDS	1	996	0.151	246	0.560	229	0.422	-	-	-	-	996	0.063	293	0.221	289	0.180
882	U13737 CDS	U54803 CDS	U84410 CDS	5	831	0.076	239	0.661	229	0.580	-	-	-	-	831	0.037	257	0.322	254	0.312
883	U13897 CDS	U93309 CDS	U14950 CDS	5	2709	0.038	843	0.407	825	0.358	187	0.834	-	-	2709	0.034	850	0.263	841	0.221
884	U13989 CDS	-	X59132 CDS	0	1317	0.121	353	0.458	345	0.346	-	-	218	0.623	-	-	-	-	-	-
885	U14108 CDS	U52222 CDS	-	0	1050	0.086	296	0.810	289	0.701	-	-	-	-	-	-	-	-	-	-
886	U14188 CDS	U90663 CDS	-	1	603	0.104	167	0.452	161	0.364	-	-	-	-	-	-	-	-	-	-
887	U14391 CDS	-	X74815 CDS	0	3321	0.026	1054	0.528	1039	0.499	283	0.302	641	0.305	-	-	-	-	-	-
888	U14528 CDS	D42049 CDS	-	1	2217	0.112	598	0.441	568	0.336	-	-	548	0.591	-	-	-	-	-	-
889	U14550 CDS	X93999 CDS	-	3	1119	0.168	278	0.557	264	0.352	-	-	-	-	-	-	-	-	-	-
890	U14631 CDS	S79554 CDS	U22424 CDS	3	1188	0.104	332	0.497	312	0.355	-	-	505	0.433	1185	0.039	365	0.170	363	0.126
891	U14722 CDS	Z31663 CDS	S76466 CDS	0	1515	0.009	496	0.412	488	0.390	-	-	-	-	1515	0.003	502	0.210	500	0.206
892	U14747 CDS	D21165 CDS	D10666 CDS	5	561	0.014	181	0.436	181	0.412	-	-	-	-	558	0.000	186	0.128	191	0.142
893	U14755 CDS	Z27410 CDS	-	0	1212	0.009	397	0.607	393	0.576	403	0.321	-	-	-	-	-	-	-	-
894	U14966 CDS	-	X06148 CDS	18	891	0.009	292	0.459	292	0.450	-	-	-	-	-	-	-	-	-	-
895	U14967 CDS	U93863 CDS	-	17	480	0.008	157	0.567	156	0.568	-	-	-	-	-	-	-	-	-	-
896	U14970 CDS	U78085 CDS	X58465 CDS	18	612	0.013	199	0.479	197	0.464	-	-	-	-	612	0.012	199	0.131	199	0.127
897	U14971 CDS	-	X66370 CDS	18	582	0.015	189	0.560	189	0.543	-	-	-	-	-	-	-	-	-	-
898	U14972 CDS	-	X13549 CDS	17	495	0.006	163	0.541	163	0.534	-	-	-	-	-	-	-	-	-	-
899	U15128 CDS	-	U21662 CDS	8	1326	0.063	397	0.379	391	0.333	-	-	-	-	-	-	-	-	-	-
900	U15592 CDS	U11073 CDS	U22663 CDS	1	1089	0.049	331	0.381	323	0.328	-	-	-	-	1089	0.005	359	0.089	357	0.084

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