Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.
Genome size (bp): 1830138
Number of genes 1650
Oriloc predictions: Origin 757 kb Terminus 1472 kb
Worning et al., 2006: Origin 324 kb Terminus 1476 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1324.811 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1056.59 kb
Consensus predictions: Origin 757 kb Terminus 1472 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 511 | NA | 1124 |
| 658 | NA | 1444 | |
| GC-skew reverse | 1091 | NA | 548 |
| 1467 | NA | 1469 | |
| AT-skew forward | 319 | NA | 781 |
| 672 | NA | 1482 | |
| AT-skew reverse | 1129 | NA | 600 |
| 1512 | NA | 1540 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 511 (1124.0155 kb) | NA | 0.02 |
| 512 (1136.1955 kb) | 658 (1444.0335 kb) | leading | 0.162 | |
| 659 (1446.7525 kb) | 827 (1829.889 kb) | lagging | -0.123 | |
| GC-skew reverse | 828 (0 kb) | 1091 (548.3625 kb) | lagging | -0.098 |
| 1092 (549.4175 kb) | 1467 (1469.1325 kb) | NA | 0.053 | |
| 1468 (1475.337 kb) | 1650 (1829.889 kb) | lagging | -0.176 | |
| AT-skew forward | 1 (0 kb) | 319 (780.6195 kb) | lagging | -0.052 |
| 320 (782.522 kb) | 672 (1482.4735 kb) | leading | -0.089 | |
| 673 (1484.089 kb) | 827 (1829.889 kb) | lagging | 0 | |
| AT-skew reverse | 828 (0 kb) | 1129 (600.434 kb) | lagging | 0.089 |
| 1130 (601.783 kb) | 1512 (1540.017 kb) | NA | 0.049 | |
| 1513 (1540.9185 kb) | 1650 (1829.889 kb) | lagging | 0.092 |