Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
Genome size (bp): 580076
Number of genes 477
Oriloc predictions: Origin 0 kb Terminus 321 kb
Worning et al., 2006: Origin 580 kb Terminus 296 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 173.22 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 577.92 kb
Consensus predictions: Origin 0 kb Terminus 321 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 155 | NA | 205 |
| GC-skew reverse | 368 | NA | 410 |
| AT-skew forward | 123 | NA | 187 |
| AT-skew reverse | 381 | NA | 435 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 155 (204.877 kb) | leading | -0.034 |
| 156 (205.687 kb) | 277 (580.033 kb) | NA | -0.077 | |
| GC-skew reverse | 278 (0 kb) | 368 (409.8255 kb) | NA | 0.06 |
| 369 (411.404 kb) | 477 (580.033 kb) | lagging | 0.006 | |
| AT-skew forward | 1 (0 kb) | 123 (187.281 kb) | leading | -0.13 |
| 124 (188.5675 kb) | 277 (580.033 kb) | NA | -0.092 | |
| AT-skew reverse | 278 (0 kb) | 381 (434.6115 kb) | NA | 0.124 |
| 382 (436.8535 kb) | 477 (580.033 kb) | lagging | 0.096 |