Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
Genome size (bp): 996422
Number of genes 726
Oriloc predictions: Origin 2 kb Terminus 521 kb
Worning et al., 2006: Origin 524 kb Terminus 0 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 79.183 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 3.86 kb
Consensus predictions: Origin 2 kb Terminus 521 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 314 | NA | 531 |
| GC-skew reverse | 606 | NA | 773 |
| AT-skew forward | 65 | NA | 91 |
| AT-skew reverse | 505 | NA | 611 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 314 (531.4805 kb) | leading | -0.074 |
| 315 (539.8395 kb) | 384 (996.422 kb) | lagging | -0.151 | |
| GC-skew reverse | 385 (0 kb) | 606 (773.091 kb) | NA | 0.083 |
| 607 (775.0285 kb) | 726 (996.422 kb) | lagging | 0.067 | |
| AT-skew forward | 1 (0 kb) | 65 (90.575 kb) | leading | -0.011 |
| 66 (92.1475 kb) | 384 (996.422 kb) | NA | -0.055 | |
| AT-skew reverse | 385 (0 kb) | 505 (610.5515 kb) | NA | 0.083 |
| 506 (611.2975 kb) | 726 (996.422 kb) | lagging | 0.054 |