Rearranged Oriloc output example: Previous Index Next
Bacteria; Cyanobacteria; Chroococcales; Synechocystis.
Genome size (bp): 3573470
Number of genes 3171
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 665 kb Terminus 3117 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 560.361 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1350.91 kb
Consensus predictions: Origin 220 kb Terminus 3062 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 174 | 0.01333 | 369 |
| AT-skew reverse | 2303 | 0.02333 | 1481 |
| 2339 | 0.03 | 1557 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 174 (369.028 kb) | NA | -0.009 |
| 175 (370.2505 kb) | 1661 (3572.4 kb) | leading | -0.046 | |
| AT-skew reverse | 1662 (0 kb) | 2303 (1480.668 kb) | NA | 0.148 |
| 2304 (1481.314 kb) | 2339 (1556.5955 kb) | leading | 0.063 | |
| 2340 (1557.5645 kb) | 3171 (3572.4 kb) | NA | 0.138 |