Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
Genome size (bp): 816394
Number of genes 689
Oriloc predictions: Origin 0 kb Terminus 445 kb
Worning et al., 2006: Origin 446 kb Terminus 1 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 672.657 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 814.13 kb
Consensus predictions: Origin 0 kb Terminus 445 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 272 | NA | 374 |
| GC-skew reverse | 517 | NA | 556 |
| AT-skew forward | 343 | NA | 553 |
| AT-skew reverse | 571 | NA | 660 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 272 (373.8325 kb) | leading | -0.083 |
| 273 (374.755 kb) | 405 (816.338 kb) | NA | -0.106 | |
| GC-skew reverse | 406 (0 kb) | 517 (556.3135 kb) | NA | 0.098 |
| 518 (557.594 kb) | 689 (816.338 kb) | lagging | 0.078 | |
| AT-skew forward | 1 (0 kb) | 343 (553.495 kb) | leading | -0.093 |
| 344 (565.1595 kb) | 405 (816.338 kb) | lagging | -0.055 | |
| AT-skew reverse | 406 (0 kb) | 571 (659.7775 kb) | NA | 0.114 |
| 572 (663.2375 kb) | 689 (816.338 kb) | lagging | 0.133 |