Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
Genome size (bp): 1358633
Number of genes 1037
Oriloc predictions: Origin 0 kb Terminus 687 kb
Worning et al., 2006: Origin 0 kb Terminus 687 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 309.335 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.68 kb
Consensus predictions: Origin 0 kb Terminus 687 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 417 | NA | 660 |
| GC-skew reverse | 867 | NA | 1114 |
| AT-skew forward | 104 | NA | 150 |
| AT-skew reverse | 646 | NA | 733 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 417 (660.269 kb) | leading | -0.052 |
| 418 (662.0785 kb) | 504 (1358.463 kb) | lagging | -0.134 | |
| GC-skew reverse | 505 (0 kb) | 867 (1113.5705 kb) | NA | 0.099 |
| 868 (1115.3355 kb) | 1037 (1358.463 kb) | lagging | 0.032 | |
| AT-skew forward | 1 (0 kb) | 104 (149.85 kb) | leading | -0.014 |
| 105 (151.9215 kb) | 504 (1358.463 kb) | NA | -0.046 | |
| AT-skew reverse | 505 (0 kb) | 646 (732.678 kb) | NA | -0.014 |
| 647 (733.71 kb) | 1037 (1358.463 kb) | lagging | 0.047 |