Rearranged Oriloc output example: Previous Index Next




Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.
Genome size (bp): 1551335
Number of genes 1529
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 620 kb Terminus 135 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 167.138 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 209.24 kb
Consensus predictions: Origin 167 kb Terminus 827 kb
Significant breakpoints (p-value <0.05):
Breakpoints P-value Chromosome coordinate (kb)
AT-skew forward4760.02333926
53401018
Segments:
From (index/coord) To (index/coord) StrandSlope
AT-skew forward 1 (0 kb)476 (926.0125 kb) NA0.162
477 (927.7965 kb)534 (1017.9545 kb) lagging0.048
535 (1019.07 kb)813 (1551.092 kb) lagging0.193