Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
Genome size (bp): 1230230
Number of genes 1051
Oriloc predictions: Origin 840 kb Terminus 215 kb
Worning et al., 2006: Origin 841 kb Terminus 216 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 348.047 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 350.28 kb, 470.29 kb
Consensus predictions: Origin 840 kb Terminus 215 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 103 | NA | 220 |
| 334 | NA | 784 | |
| GC-skew reverse | 594 | NA | 218 |
| 894 | NA | 841 | |
| AT-skew forward | 101 | NA | 215 |
| 347 | NA | 819 | |
| AT-skew reverse | 594 | NA | 218 |
| 775 | NA | 644 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 103 (219.7085 kb) | leading | 0.129 |
| 104 (224.158 kb) | 334 (784.1915 kb) | lagging | -0.201 | |
| 335 (784.909 kb) | 522 (1229.832 kb) | leading | 0.057 | |
| GC-skew reverse | 523 (0 kb) | 594 (218.481 kb) | leading | 0.179 |
| 595 (218.765 kb) | 894 (841.146 kb) | lagging | -0.104 | |
| 895 (843.3645 kb) | 1051 (1229.832 kb) | leading | 0.127 | |
| AT-skew forward | 1 (0 kb) | 101 (214.811 kb) | leading | -0.122 |
| 102 (215.2805 kb) | 347 (818.8895 kb) | lagging | -0.069 | |
| 348 (821.929 kb) | 522 (1229.832 kb) | leading | -0.127 | |
| AT-skew reverse | 523 (0 kb) | 594 (218.481 kb) | leading | 0.059 |
| 595 (218.765 kb) | 775 (644.3215 kb) | lagging | 0.175 | |
| 776 (645.251 kb) | 1051 (1229.832 kb) | NA | 0.081 |
More G than C on the leading strand for replication.