Rearranged Oriloc output example: Previous Index Next
Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.
Genome size (bp): 2648638
Number of genes 2620
Oriloc predictions: Origin 0 kb Terminus 1345 kb
Worning et al., 2006: Origin 2479 kb Terminus 1350 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1.722 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2.59 kb
Consensus predictions: Origin 0 kb Terminus 1345 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 276 | NA | 523 |
| AT-skew forward | 766 | NA | 1449 |
| AT-skew reverse | 1941 | NA | 1296 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 276 (523.277 kb) | leading | -0.097 |
| 277 (524.08 kb) | 1350 (2648.524 kb) | NA | -0.077 | |
| AT-skew forward | 1 (0 kb) | 766 (1448.786 kb) | leading | -0.149 |
| 767 (1452.042 kb) | 1350 (2648.524 kb) | lagging | -0.085 | |
| AT-skew reverse | 1351 (0 kb) | 1941 (1296.4735 kb) | leading | 0.078 |
| 1942 (1299.7385 kb) | 2620 (2648.524 kb) | lagging | 0.142 |