Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Ureaplasma.
Genome size (bp): 751719
Number of genes 614
Oriloc predictions: Origin 30 kb Terminus 459 kb
Worning et al., 2006: Origin 41 kb Terminus 477 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 7.598 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.69 kb
Consensus predictions: Origin 0 kb Terminus 459 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 270 | 0 | 465 |
| GC-skew reverse | 470 | 0.04667 | 467 |
| AT-skew forward | 85 | 0.00333 | 190 |
| 94 | 0.00167 | 193 | |
| 134 | 0.03833 | 268 | |
| 162 | 0.02167 | 286 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 270 (465.478 kb) | leading | 0.01 |
| 271 (469.4695 kb) | 330 (751.549 kb) | lagging | -0.131 | |
| GC-skew reverse | 331 (0 kb) | 470 (467.002 kb) | leading | 0.06 |
| 471 (468.704 kb) | 614 (751.549 kb) | lagging | -0.04 | |
| AT-skew forward | 1 (0 kb) | 85 (189.7935 kb) | leading | -0.063 |
| 86 (190.4065 kb) | 94 (192.8035 kb) | leading | 0.165 | |
| 95 (193.4825 kb) | 134 (267.907 kb) | leading | -0.07 | |
| 135 (270.4155 kb) | 162 (285.616 kb) | leading | 0.058 | |
| 163 (287.062 kb) | 330 (751.549 kb) | NA | -0.099 |