Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia.
Genome size (bp): 1072950
Number of genes 904
Oriloc predictions: Origin 0 kb Terminus 531 kb
Worning et al., 2006: Origin 1 kb Terminus 534 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 545.141 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 630.75 kb, 657.23 kb
Consensus predictions: Origin 0 kb Terminus 531 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 240 | 0 | 546 |
| GC-skew reverse | 649 | 0 | 547 |
| AT-skew forward | 231 | 0 | 492 |
| AT-skew reverse | 665 | 0.00667 | 589 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 240 (545.5405 kb) | leading | 0.261 |
| 241 (547.3605 kb) | 453 (1072.918 kb) | lagging | -0.224 | |
| GC-skew reverse | 454 (0 kb) | 649 (547.3015 kb) | leading | 0.186 |
| 650 (548.521 kb) | 904 (1072.918 kb) | lagging | -0.268 | |
| AT-skew forward | 1 (0 kb) | 231 (492.1385 kb) | leading | -0.162 |
| 232 (493.8495 kb) | 453 (1072.918 kb) | lagging | -0.085 | |
| AT-skew reverse | 454 (0 kb) | 665 (588.721 kb) | leading | 0.085 |
| 666 (589.3765 kb) | 904 (1072.918 kb) | lagging | 0.166 |
More G than C on the leading strand for replication.