Rearranged Oriloc output example: Previous Index Next




Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Wolbachieae; Wolbachia.
Genome size (bp): 1267782
Number of genes 1195
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 668 kb Terminus 271 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 631.461 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.84 kb, 1097.43 kb
Consensus predictions: Origin NA Terminus NA
Significant breakpoints (p-value <0.05):
Breakpoints P-value Chromosome coordinate (kb)
AT-skew forward293NA699
470NA1029
Segments:
From (index/coord) To (index/coord) StrandSlope
AT-skew forward 1 (0 kb)293 (698.669 kb) NA0.013
294 (699.9895 kb)470 (1028.747 kb) NA-0.029
471 (1032.46 kb)605 (1267.608 kb) NA0.006