Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Genome size (bp): 3940880
Number of genes 3672
Oriloc predictions: Origin 0 kb Terminus 1979 kb
Worning et al., 2006: Origin 0 kb Terminus 1982 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 366.064 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.14 kb, 2020.04 kb
Consensus predictions: Origin 0 kb Terminus 1979 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1442 | 0 | 1974 |
| GC-skew reverse | 2221 | 0 | 1986 |
| AT-skew forward | 1491 | 0.00667 | 2348 |
| AT-skew reverse | 2251 | 0 | 2024 |
| 2317 | 0 | 2068 | |
| 3221 | 0 | 3252 | |
| 3272 | 0 | 3289 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1442 (1974.0355 kb) | leading | 0.344 |
| 1443 (1976.4295 kb) | 1859 (3940.781 kb) | lagging | -0.149 | |
| GC-skew reverse | 1860 (0 kb) | 2221 (1985.947 kb) | leading | 0.12 |
| 2222 (1987.046 kb) | 3672 (3940.781 kb) | lagging | -0.351 | |
| AT-skew forward | 1 (0 kb) | 1491 (2348.266 kb) | leading | 0.007 |
| 1492 (2353.177 kb) | 1859 (3940.781 kb) | lagging | -0.036 | |
| AT-skew reverse | 1860 (0 kb) | 2251 (2024.02 kb) | leading | 0.01 |
| 2252 (2026.275 kb) | 2317 (2068.3815 kb) | lagging | -0.152 | |
| 2318 (2070.7935 kb) | 3221 (3251.9705 kb) | lagging | 0.002 | |
| 3222 (3252.7725 kb) | 3272 (3289.4985 kb) | lagging | -0.173 | |
| 3273 (3290.431 kb) | 3672 (3940.781 kb) | lagging | -0.015 |
More G than C on the leading strand for replication.