Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.
Genome size (bp): 1268755
Number of genes 1373
Oriloc predictions: Origin 0 kb Terminus 630 kb
Worning et al., 2006: Origin 1259 kb Terminus 682 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1268.609 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 863.61 kb
Consensus predictions: Origin 0 kb Terminus 630 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 90 | NA | 155 |
| 193 | NA | 326 | |
| 354 | NA | 607 | |
| 451 | NA | 768 | |
| GC-skew reverse | 960 | NA | 704 |
| AT-skew forward | 354 | NA | 607 |
| AT-skew reverse | 1038 | NA | 794 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 90 (154.868 kb) | leading | 0.133 |
| 91 (156.3075 kb) | 193 (326.0295 kb) | leading | 0.225 | |
| 194 (326.8725 kb) | 354 (607.4135 kb) | leading | 0.204 | |
| 355 (609.4305 kb) | 451 (767.8885 kb) | NA | 0.098 | |
| 452 (772.6175 kb) | 654 (1268.36 kb) | lagging | -0.013 | |
| GC-skew reverse | 655 (0 kb) | 960 (704.1815 kb) | leading | 0.015 |
| 961 (705.0905 kb) | 1373 (1268.36 kb) | lagging | -0.19 | |
| AT-skew forward | 1 (0 kb) | 354 (607.4135 kb) | leading | -0.074 |
| 355 (609.4305 kb) | 654 (1268.36 kb) | lagging | -0.019 | |
| AT-skew reverse | 655 (0 kb) | 1038 (793.5185 kb) | NA | 0.007 |
| 1039 (793.9295 kb) | 1373 (1268.36 kb) | lagging | 0.062 |
More G than C on the leading strand for replication.