Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia.
Genome size (bp): 1522076
Number of genes 1428
Oriloc predictions: Origin 0 kb Terminus 752 kb
Worning et al., 2006: Origin 1504 kb Terminus 762 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1521.93 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 598.19 kb, 933.5 kb, 1139.07 kb
Consensus predictions: Origin 0 kb Terminus 752 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 347 | 0 | 753 |
| GC-skew reverse | 987 | 0 | 770 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 347 (752.9595 kb) | leading | 0.162 |
| 348 (754.2005 kb) | 653 (1521.685 kb) | lagging | 0.023 | |
| GC-skew reverse | 654 (0 kb) | 987 (769.7505 kb) | leading | -0.092 |
| 988 (771.5635 kb) | 1428 (1521.685 kb) | lagging | -0.209 |