Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.
Genome size (bp): 2117144
Number of genes 2059
Oriloc predictions: Origin 0 kb Terminus 978 kb
Worning et al., 2006: Origin 0 kb Terminus 960 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2117.016 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2001.87 kb
Consensus predictions: Origin 0 kb Terminus 978 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 603 | NA | 1012 |
| GC-skew reverse | 1394 | NA | 960 |
| AT-skew forward | 567 | NA | 935 |
| AT-skew reverse | 1408 | NA | 992 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 603 (1011.9425 kb) | leading | -0.009 |
| 604 (1017.222 kb) | 1053 (2116.943 kb) | lagging | -0.121 | |
| GC-skew reverse | 1054 (0 kb) | 1394 (959.5415 kb) | leading | 0.159 |
| 1395 (963.171 kb) | 2059 (2116.943 kb) | lagging | 0.027 | |
| AT-skew forward | 1 (0 kb) | 567 (935.298 kb) | leading | -0.35 |
| 568 (935.7025 kb) | 1053 (2116.943 kb) | lagging | -0.199 | |
| AT-skew reverse | 1054 (0 kb) | 1408 (992.029 kb) | leading | 0.193 |
| 1409 (992.78 kb) | 2059 (2116.943 kb) | lagging | 0.307 |
More G than C on the leading strand for replication.