Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.
Genome size (bp): 1177787
Number of genes 1139
Oriloc predictions: Origin 93 kb Terminus 767 kb
Worning et al., 2006: Origin 94 kb Terminus 748 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 878.595 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 93 kb Terminus 767 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 65 | NA | 119 |
| 398 | NA | 775 | |
| GC-skew reverse | 887 | NA | 765 |
| AT-skew forward | 43 | NA | 84 |
| 342 | NA | 654 | |
| AT-skew reverse | 873 | NA | 742 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 65 (118.8585 kb) | NA | -0.113 |
| 66 (119.693 kb) | 398 (775.3905 kb) | leading | 0.011 | |
| 399 (776.9275 kb) | 549 (1177.47 kb) | lagging | -0.142 | |
| GC-skew reverse | 550 (0 kb) | 887 (764.6755 kb) | leading | 0.129 |
| 888 (765.787 kb) | 1139 (1177.47 kb) | lagging | -0.012 | |
| AT-skew forward | 1 (0 kb) | 43 (83.8505 kb) | lagging | -0.14 |
| 44 (84.36 kb) | 342 (653.739 kb) | leading | -0.333 | |
| 343 (654.2525 kb) | 549 (1177.47 kb) | NA | -0.211 | |
| AT-skew reverse | 550 (0 kb) | 873 (741.8825 kb) | leading | 0.201 |
| 874 (746.3605 kb) | 1139 (1177.47 kb) | lagging | 0.328 |
More G than C on the leading strand for replication.