Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium.
Genome size (bp): 3309401
Number of genes 2993
Oriloc predictions: Origin 0 kb Terminus 1740 kb
Worning et al., 2006: Origin 4 kb Terminus 1563 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 35.94 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.79 kb
Consensus predictions: Origin 35 kb Terminus 1740 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 863 | NA | 1651 |
| GC-skew reverse | 2025 | NA | 1424 |
| AT-skew forward | 1143 | NA | 2389 |
| AT-skew reverse | 2029 | NA | 1432 |
| 2694 | NA | 2732 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 863 (1650.5655 kb) | leading | -0.105 |
| 864 (1655.676 kb) | 1482 (3308.553 kb) | lagging | -0.228 | |
| GC-skew reverse | 1483 (0 kb) | 2025 (1423.9405 kb) | leading | 0.238 |
| 2026 (1428.2675 kb) | 2993 (3308.553 kb) | NA | 0.085 | |
| AT-skew forward | 1 (0 kb) | 1143 (2388.8305 kb) | NA | -0.158 |
| 1144 (2391.5175 kb) | 1482 (3308.553 kb) | lagging | -0.111 | |
| AT-skew reverse | 1483 (0 kb) | 2029 (1431.6355 kb) | leading | 0.093 |
| 2030 (1434.412 kb) | 2694 (2731.8025 kb) | NA | 0.171 | |
| 2695 (2734.3205 kb) | 2993 (3308.553 kb) | lagging | 0.149 |