Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium.
Genome size (bp): 2462499
Number of genes 2104
Oriloc predictions: Origin 0 kb Terminus 1234 kb
Worning et al., 2006: Origin 0 kb Terminus 1084 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2462.344 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 0 kb Terminus 1234 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 599 | NA | 1286 |
| GC-skew reverse | 1308 | NA | 992 |
| AT-skew forward | 602 | NA | 1290 |
| AT-skew reverse | 1369 | NA | 1148 |
| 1829 | NA | 1949 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 599 (1285.7225 kb) | leading | -0.068 |
| 600 (1286.3445 kb) | 971 (2461.792 kb) | lagging | -0.15 | |
| GC-skew reverse | 972 (0 kb) | 1308 (992.135 kb) | leading | 0.178 |
| 1309 (1002.5695 kb) | 2104 (2461.792 kb) | lagging | 0.048 | |
| AT-skew forward | 1 (0 kb) | 602 (1289.7125 kb) | leading | -0.235 |
| 603 (1291.5965 kb) | 971 (2461.792 kb) | lagging | -0.119 | |
| AT-skew reverse | 972 (0 kb) | 1369 (1147.763 kb) | leading | 0.109 |
| 1370 (1154.1415 kb) | 1829 (1948.814 kb) | lagging | 0.212 | |
| 1830 (1953.699 kb) | 2104 (2461.792 kb) | lagging | 0.274 |
More G than C on the leading strand for replication.