Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
Genome size (bp): 2256640
Number of genes 1727
Oriloc predictions: Origin 1651 kb Terminus 528 kb
Worning et al., 2006: Origin 1653 kb Terminus 530 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1572.246 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1625.01 kb
Consensus predictions: Origin 1651 kb Terminus 528 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew reverse | 1329 | 0.03333 | 1153 |
| AT-skew forward | 660 | 0.00333 | 1901 |
| 743 | 0.02 | 2033 | |
| AT-skew reverse | 1022 | 0.00667 | 576 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew reverse | 861 (0 kb) | 1329 (1153.4815 kb) | NA | 0.161 |
| 1330 (1154.8595 kb) | 1727 (2256.529 kb) | NA | 0.122 | |
| AT-skew forward | 1 (0 kb) | 660 (1900.6875 kb) | NA | -0.184 |
| 661 (1901.083 kb) | 743 (2032.687 kb) | leading | -0.476 | |
| 744 (2038.6605 kb) | 860 (2256.529 kb) | leading | -0.281 | |
| AT-skew reverse | 861 (0 kb) | 1022 (575.5075 kb) | NA | 0.133 |
| 1023 (576.564 kb) | 1727 (2256.529 kb) | NA | 0.25 |