Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.
Genome size (bp): 1207381
Number of genes 1148
Oriloc predictions: Origin 0 kb Terminus 512 kb
Worning et al., 2006: Origin 11 kb Terminus 543 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 410.441 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.75 kb
Consensus predictions: Origin 0 kb Terminus 512 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 297 | NA | 518 |
| GC-skew reverse | 802 | NA | 502 |
| AT-skew forward | 318 | NA | 573 |
| AT-skew reverse | 802 | NA | 502 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 297 (517.587 kb) | leading | 0.015 |
| 298 (523.3945 kb) | 590 (1207.164 kb) | lagging | -0.132 | |
| GC-skew reverse | 591 (0 kb) | 802 (501.544 kb) | leading | 0.128 |
| 803 (507.9615 kb) | 1148 (1207.164 kb) | lagging | -0.011 | |
| AT-skew forward | 1 (0 kb) | 318 (572.9915 kb) | leading | -0.32 |
| 319 (575.1075 kb) | 590 (1207.164 kb) | lagging | -0.192 | |
| AT-skew reverse | 591 (0 kb) | 802 (501.544 kb) | leading | 0.163 |
| 803 (507.9615 kb) | 1148 (1207.164 kb) | lagging | 0.335 |
More G than C on the leading strand for replication.