Breakpoints | P-value | Chromosome coordinate (kb) | |
GC-skew forward | 757 | 0 | 1646 |
1135 | 0.00667 | 2319 | |
2482 | 0.01333 | 4958 | |
GC-skew reverse | 5358 | 0.00667 | 2859 |
6050 | 0 | 4707 | |
AT-skew forward | 306 | 0 | 681 |
754 | 0 | 1641 | |
1146 | 0 | 2335 | |
2531 | 0 | 5076 | |
AT-skew reverse | 4802 | 0 | 1407 |
5330 | 0.04889 | 2795 | |
6266 | 0.00222 | 5211 |
From (index/coord) | To (index/coord) | Strand | Slope | |
GC-skew forward | 1 (0 kb) | 757 (1645.778 kb) | NA | -0.107 |
758 (1648.5805 kb) | 1135 (2319.173 kb) | leading | -0.02 | |
1136 (2320.658 kb) | 2482 (4957.524 kb) | leading | -0.076 | |
2483 (4958.895 kb) | 4147 (9105.797 kb) | lagging | -0.118 | |
GC-skew reverse | 4148 (0 kb) | 5358 (2859.041 kb) | NA | 0.097 |
5359 (2859.841 kb) | 6050 (4707.2085 kb) | leading | 0.141 | |
6051 (4710.0715 kb) | 8317 (9105.797 kb) | lagging | 0.078 | |
AT-skew forward | 1 (0 kb) | 306 (680.5335 kb) | lagging | -0.189 |
307 (685.99 kb) | 754 (1641.0115 kb) | leading | -0.331 | |
755 (1641.4245 kb) | 1146 (2334.5915 kb) | leading | -0.153 | |
1147 (2337.9065 kb) | 2531 (5076.3265 kb) | leading | -0.311 | |
2532 (5079.429 kb) | 4147 (9105.797 kb) | lagging | -0.189 | |
AT-skew reverse | 4148 (0 kb) | 4802 (1407.391 kb) | NA | 0.255 |
4803 (1408.4165 kb) | 5330 (2794.706 kb) | leading | 0.138 | |
5331 (2796.3425 kb) | 6266 (5211.3115 kb) | leading | 0.194 | |
6267 (5212.6245 kb) | 8317 (9105.797 kb) | lagging | 0.295 |