Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.
Genome size (bp): 2124241
Number of genes 2023
Oriloc predictions: Origin 2010 kb Terminus 1027 kb
Worning et al., 2006: Origin 2011 kb Terminus 1046 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2010.838 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.53 kb
Consensus predictions: Origin 2010 kb Terminus 1027 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 554 | 0.00667 | 1043 |
| 909 | 0.01 | 2015 | |
| GC-skew reverse | 1393 | 0 | 1005 |
| AT-skew forward | 545 | 0.04833 | 1021 |
| 759 | 0.01833 | 1615 | |
| 786 | 0.03333 | 1686 | |
| 901 | 0.01833 | 1997 | |
| AT-skew reverse | 1418 | 0 | 1067 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 554 (1042.68 kb) | leading | -0.008 |
| 555 (1043.438 kb) | 909 (2015.303 kb) | lagging | -0.141 | |
| 910 (2016.7215 kb) | 985 (2124.032 kb) | leading | -0.029 | |
| GC-skew reverse | 986 (0 kb) | 1393 (1005.0665 kb) | leading | 0.116 |
| 1394 (1009.921 kb) | 2023 (2124.032 kb) | lagging | -0.006 | |
| AT-skew forward | 1 (0 kb) | 545 (1021.3115 kb) | leading | -0.301 |
| 546 (1022.173 kb) | 759 (1614.897 kb) | lagging | -0.166 | |
| 760 (1617.307 kb) | 786 (1685.762 kb) | lagging | -0.331 | |
| 787 (1687.349 kb) | 901 (1997.142 kb) | lagging | -0.185 | |
| 902 (1998.0155 kb) | 985 (2124.032 kb) | leading | -0.348 | |
| AT-skew reverse | 986 (0 kb) | 1418 (1066.688 kb) | leading | 0.201 |
| 1419 (1071.351 kb) | 2023 (2124.032 kb) | lagging | 0.338 |
More G than C on the leading strand for replication.