Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
Genome size (bp): 1144377
Number of genes 930
Oriloc predictions: Origin 0 kb Terminus 574 kb
Worning et al., 2006: Origin 0 kb Terminus 574 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 822.392 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 413.48 kb, 529.73 kb
Consensus predictions: Origin 0 kb Terminus 574 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 261 | 0 | 583 |
| GC-skew reverse | 556 | 0.02 | 243 |
| 585 | 0.02444 | 324 | |
| 706 | 0.03333 | 605 | |
| AT-skew forward | 253 | 0.00667 | 568 |
| AT-skew reverse | 698 | 0 | 584 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 261 (582.5295 kb) | leading | 0.11 |
| 262 (584.7255 kb) | 476 (1144.231 kb) | lagging | -0.142 | |
| GC-skew reverse | 477 (0 kb) | 556 (242.7695 kb) | leading | 0.094 |
| 557 (245.623 kb) | 585 (324.2265 kb) | leading | 0.345 | |
| 586 (327.6995 kb) | 706 (604.8715 kb) | leading | 0.103 | |
| 707 (607.287 kb) | 930 (1144.231 kb) | lagging | -0.105 | |
| AT-skew forward | 1 (0 kb) | 253 (568.3425 kb) | leading | -0.129 |
| 254 (568.8215 kb) | 476 (1144.231 kb) | lagging | -0.061 | |
| AT-skew reverse | 477 (0 kb) | 698 (584.2575 kb) | leading | 0.067 |
| 699 (585.388 kb) | 930 (1144.231 kb) | lagging | 0.13 |
More G than C on the leading strand for replication.