Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
Genome size (bp): 1173390
Number of genes 998
Oriloc predictions: Origin 0 kb Terminus 588 kb
Worning et al., 2006: Origin NA kb Terminus NA kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 857.337 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 420.13 kb, 536.29 kb
Consensus predictions: Origin 0 kb Terminus 588 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 276 | NA | 594 |
| GC-skew reverse | 643 | NA | 357 |
| 756 | NA | 604 | |
| 878 | NA | 884 | |
| AT-skew forward | 279 | NA | 598 |
| AT-skew reverse | 749 | NA | 590 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 276 (594.1435 kb) | leading | 0.132 |
| 277 (595.182 kb) | 516 (1173.383 kb) | lagging | -0.132 | |
| GC-skew reverse | 517 (0 kb) | 643 (357.184 kb) | leading | 0.179 |
| 644 (358.1525 kb) | 756 (604.281 kb) | leading | 0.124 | |
| 757 (606.7115 kb) | 878 (883.852 kb) | lagging | -0.171 | |
| 879 (884.8165 kb) | 998 (1173.383 kb) | lagging | -0.117 | |
| AT-skew forward | 1 (0 kb) | 279 (597.6135 kb) | leading | -0.136 |
| 280 (598.553 kb) | 516 (1173.383 kb) | lagging | -0.055 | |
| AT-skew reverse | 517 (0 kb) | 749 (590.329 kb) | leading | 0.067 |
| 750 (591.5175 kb) | 998 (1173.383 kb) | lagging | 0.144 |
More G than C on the leading strand for replication.