Rearranged Oriloc output example: Previous Index Next
Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales; Bacteroidaceae; Bacteroides.
Genome size (bp): 6260361
Number of genes 4778
Oriloc predictions: Origin 4034 kb Terminus 1173 kb
Worning et al., 2006: Origin 4038 kb Terminus 1185 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 362.736 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2698.16 kb
Consensus predictions: Origin 4034 kb Terminus 1173 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 558 | NA | 1226 |
| 1462 | NA | 4045 | |
| GC-skew reverse | 2751 | NA | 1146 |
| 4068 | NA | 4024 | |
| AT-skew forward | 573 | NA | 1329 |
| 1457 | NA | 4032 | |
| AT-skew reverse | 2782 | NA | 1192 |
| 4067 | NA | 4018 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 558 (1226.1965 kb) | leading | 0.196 |
| 559 (1235.1475 kb) | 1462 (4044.664 kb) | lagging | -0.127 | |
| 1463 (4049.998 kb) | 2365 (6259.965 kb) | leading | 0.159 | |
| GC-skew reverse | 2366 (0 kb) | 2751 (1146.193 kb) | leading | 0.114 |
| 2752 (1147.3055 kb) | 4068 (4024.0495 kb) | lagging | -0.16 | |
| 4069 (4032.048 kb) | 4778 (6259.965 kb) | leading | 0.138 | |
| AT-skew forward | 1 (0 kb) | 573 (1329.471 kb) | leading | -0.176 |
| 574 (1330.614 kb) | 1457 (4032.2535 kb) | lagging | 0.037 | |
| 1458 (4035.0895 kb) | 2365 (6259.965 kb) | leading | -0.171 | |
| AT-skew reverse | 2366 (0 kb) | 2782 (1191.9245 kb) | leading | -0.006 |
| 2783 (1192.68 kb) | 4067 (4017.578 kb) | lagging | 0.171 | |
| 4068 (4024.0495 kb) | 4778 (6259.965 kb) | leading | -0.013 |
More G than C on the leading strand for replication.