Rearranged Oriloc output example: Previous Index Next
Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.
Genome size (bp): 1751080
Number of genes 1883
Oriloc predictions: Origin 0 kb Terminus 886 kb
Worning et al., 2006: Origin 0 kb Terminus 867 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1360.24 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 538.65 kb
Consensus predictions: Origin 0 kb Terminus 886 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 445 | 0 | 806 |
| GC-skew reverse | 1449 | 0 | 933 |
| 1811 | 0.04 | 1596 | |
| AT-skew forward | 476 | 0 | 870 |
| AT-skew reverse | 1448 | 0 | 932 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 445 (806.331 kb) | leading | 0.224 |
| 446 (808.0985 kb) | 953 (1750.901 kb) | lagging | -0.021 | |
| GC-skew reverse | 954 (0 kb) | 1449 (933.328 kb) | leading | 0.025 |
| 1450 (934.1545 kb) | 1811 (1595.5925 kb) | lagging | -0.2 | |
| 1812 (1596.9995 kb) | 1883 (1750.901 kb) | lagging | -0.303 | |
| AT-skew forward | 1 (0 kb) | 476 (869.5775 kb) | leading | -0.113 |
| 477 (870.341 kb) | 953 (1750.901 kb) | lagging | 0.021 | |
| AT-skew reverse | 954 (0 kb) | 1448 (932.324 kb) | leading | -0.031 |
| 1449 (933.328 kb) | 1883 (1750.901 kb) | lagging | 0.118 |
More G than C on the leading strand for replication.