Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
Genome size (bp): 1225935
Number of genes 1113
Oriloc predictions: Origin 838 kb Terminus 213 kb
Worning et al., 2006: Origin 837 kb Terminus 215 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 345.461 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 347.7 kb, 467.79 kb
Consensus predictions: Origin 838 kb Terminus 213 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 109 | NA | 217 |
| 357 | NA | 801 | |
| GC-skew reverse | 622 | NA | 216 |
| 944 | NA | 838 | |
| AT-skew forward | 105 | NA | 206 |
| 300 | NA | 626 | |
| AT-skew reverse | 627 | NA | 219 |
| 815 | NA | 633 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 109 (217.1155 kb) | leading | 0.113 |
| 110 (221.565 kb) | 357 (800.7725 kb) | lagging | -0.197 | |
| 358 (802.263 kb) | 549 (1225.537 kb) | leading | 0.054 | |
| GC-skew reverse | 550 (0 kb) | 622 (215.888 kb) | leading | 0.173 |
| 623 (216.172 kb) | 944 (838.452 kb) | lagging | -0.095 | |
| 945 (840.6785 kb) | 1113 (1225.537 kb) | leading | 0.137 | |
| AT-skew forward | 1 (0 kb) | 105 (206.2135 kb) | leading | -0.13 |
| 106 (209.425 kb) | 300 (626.05 kb) | lagging | -0.059 | |
| 301 (627.9345 kb) | 549 (1225.537 kb) | NA | -0.117 | |
| AT-skew reverse | 550 (0 kb) | 627 (219.243 kb) | leading | 0.06 |
| 628 (224.285 kb) | 815 (633.4645 kb) | lagging | 0.167 | |
| 816 (634.305 kb) | 1113 (1225.537 kb) | NA | 0.083 |